Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01422 ATGGTCATTCAAATCTCCACATTTATTTTGATAGTATTAAAGGTTCTCTTAGATGCCACCACTACTAGTAGCGGAATGCCAACATCTAAATATTCTCCATCCATGGTTAATGAAGAAGAAAGGGCTTTGCTCCAAAGCAATTGGTGGAGTGGCAAAAACTTCTCAAACCATTGCAAGTGGAATGGTATCGAGTGCAATGATGCTGGAAGCATCATAAAGATTTCAATTTTAACTTCCCGTTATCTGTCCTCTTCTCAACCACAGCTTCGAGACATGAACTGGACTGCATTCCCAAATTTAGTCAGTCTTGATCTGAGTGGAATCGGTCTATGGGGACCCATCCCTGAGAATATTGGTGCACTTTCAAAGCTCACCCATCTCAACATTTCCCATAATAATATCAGGGGTAAGCTCCCTCCTATAATTGTAAATCTCACTCATCTTGTGATGTTTAATGTTTCTTTCAATGGCATCATTGGCCAGATTCCAGAAGAAATAGGCAATTTGAAGAACCTTGTAACACTAGATATGAGCTCAAACAATTTCATTGGATTCATCCCTTCTAGTTTGGGCATGTTGACAAGTCTCCTCCATATGCATCTGTCTGATAATTACTTAACTCGTCAGATACCTCCAGAAATAGGGAAATTAGAAAATCTGGTGATATTTGACATTGCTGGCAACTCGCTGTATGGTCCTATTCCTCTTGATATTGGAAATTTAAAGAACTTGAAAGAGCTATACATCGCGAGAAACAATCTCACTAGTGCCCTACCTAGTACACTTGCCAACCTTTCTCAACTTACCACACTTGATGTCTCTCAGAATTATTTAAGTGGTGACATTCCATCAGAATTGGGTCATATCAACAGTCTCACCCACTTGGGCCTCGGCGATAACCAATTAACAGGTGAGCTGCCTTTGGCAATATCAAACCTCACTCACCTTGTGATGCTTAATGTTTCTTTCAATGGTATCTATGGTCAGATACCGAAAGAAATAGCGAAATTGGAAAATCTAGTTATATTTGACATTACTGGCAACGGGCTGTATTCTCCTATTCCTCTTGACATTGGAAAATTAAAGAACTTGAAAGAGCTATACATTGCGAGAAACTTCATCAAGGGTGCCCTACCTAGTACACTTGCCAACCTTTCTCAACTTACCGCACTTGATGTCTCTCATAATGATTTAAGTGGTGGCATTCCCTCAGAATTGGGTCATATCGACAGTCTCACCCACCTATTCCTCGGCAATAACCGATTTACAGGTGAGCTGCCTTGTGCAATTGCAAACCTCACTCACCTTGTGATGCTTAATGTTTCTTTCAATGGTATCTATGGCCAGATTCCAAATGAAATAAGCAATTGGAAGAACCTAGTGACACTAGACTTGAGTTCAAACAACTTCTTTGGATCAATCACTTCTAGTTTGGGACATTTGAATAACCTTGTGACACTAGACTTGAGTTCAAACAACCTCAATGGATCAATCCCTTCTAGTTTTGGCAATTTGAAGAACCTTGTGACACTAAACTTGAATTCAAACAACCTCAAAGGATCAATCCCTTCAGGTTTGGGCTGTTTGAAGAACCTTGTGACACTAGACTTAAGTTCAAACAACTTTGTTCCATCAATCCTTTCTAGTTTGTGCAGTTTGAAGAACCTTGTGAGACTAGACTTGAGCTCAAACAATTTCAATGGGTCCATTCCTCCTTGTTTGGTCCTTTTGTCCAGACTTAGCCATATGACTTTGTCGGATAATTTCTTAACAGGTGAGATACCTCAAGAAATAGGGAAATTAAAGAAACTTGAGACACTAGACTTGAATTCAAACAACCTCATTAGATCAATCCCTTGTAGTTTGGGCAATTTGAGGAACCTTGTGACACTAGACTTGAGTTCAAACAACCTCATTGGATCAATCCCTTCTAGTTTGTGCAATTTGAAGAACCTTTTGAGACTAGACTTGAGCTCAAACAAGTTCAATGGGTCCATTCCTTCTTGTTTGGTCCTTTTGTCCAGACTTAGCTATATGAAGTTGTCGGATAATTTCTTAACAGGTGAGGTACCTCAAGAAATAGGGAAATTAGAGAACTTGACTGAGTTAGACCTTTCTAACAATAGACTCACTGGACAAATCCTTTCTGATTTTTATATTTTATCTTCTTTAGTAACCCTGAACCTTTCGTACAACCAAATTAGTGGATCCATTCCCTTAGAAATAGCATCAATGAGCAATTTAAATTGTCTAGATCTTAGTGTGAATCATCTCCATGGTCCCATTCTTGAAGAAATTGGAAATTTAAAGAAATTGTCTGAGCTAAACCTTTCTGTAAACAACTTCCAGGGTTCTATTCCTCTATCTTTGTTTGAGTTAACTTTCTTAAGAAGTTTAGATCTCTCTACAAATCAAATAAACGGTTCCATAAATAAAAAAATTGAAAATCTGAGATATCTGCTTAATATAAACTTATCGAATAATAACTTGAGCGGAGAGATACCCTCTGACTTGTGTGGTAGAAATCATGTTGATCTCAGCAACAATAACTTCAGCGGCAAGGTACTGGCAGAATTTTATTCTTGTTATGGGACTGATGCATCCAGTTCTAGAACCAACTCGGCAAAGCAATCAGTGAAGTTTTTTATTATAGTACCAAGTTGCCTTTTCGTCCTAATTGGGTCCAGCTTCGTTTTTCTATCTAAATTTAAAAATATCAAATCTAAAGATAGAAAAACAAAGAGCGGGAACTTGCTTTCAATATGGAACTATGATGGTACAATTGCATATGAAGATATTATTGAAGCAACTGAGGACTTTGACATCAGGTATTGCATTGGCACCGGAGGTTACGGTAGTGTCTATAGAGCACAACTTCCTAGCGGCAAAATTGTTGCACTAAAGAAACTCCACCGGTTAGAGTCTCAAGAGCCATCTTTTGACAGAAGTTTCCGAAATGAGCTCAAAATGTTGACCGAAATCCGTCATAGAAACATTATCAAGCTATATGGCTTTTGTTTACACAACAGGTGCAGGTTTCTAGTGTATGAGTATATGGAGAGAGGAAGCTTACATTGGGCTTTAAGCAATGATGACGAAGCTCAAGAGTTGAATTGGAGCAAAAGGGTGAACATCATCAAAGGAATAGCGAATGCTTTATCTTATATGCATCATGATTGTACTTCCACAATTCTCCACCGAGACATATCAAGTAGCAATATTTTGTTGAACTCTGAAATGGAGGCATTTGTCTCAGACTTTGGCACTGCAAGAATCCTTGATCCTGAATCATCTAATCAAACTCTACTTGTTGGAACTATTGGATACGTTGCACCAGAGCTTGCATACACATTGTGCGTGACAGAAAAATGTGATGTTTATAGCTTTGGAGTGGTGGCTTTAGAAACAATGATGGGAAAACATCCAGGAGAGTTGATATCCTCTTCAAGAAATTCATGTCCTCAAGATGTGCTGTTGAAAGATGTGATGGACTCACGTCTTCCTCTTCCATTCTTACGTAAAGATGCCAAAGACATCGTTCTTGTGGTGACACTTGCTTTCTCATGCCTGCATACTGATCCGAAATCTCGACCATCAATGAAAGATGTTGTTAAGGAGTTTCTTGTTTCCAAGCCACCATTGCTGCAACCTTTCAACGATATTTCCATTCAGCAGTTGATTAATAAAGAATCCATCTATCAGTAA 3705 0.3862 MVIQISTFILIVLKVLLDATTTSSGMPTSKYSPSMVNEEERALLQSNWWSGKNFSNHCKWNGIECNDAGSIIKISILTSRYLSSSQPQLRDMNWTAFPNLVSLDLSGIGLWGPIPENIGALSKLTHLNISHNNIRGKLPPIIVNLTHLVMFNVSFNGIIGQIPEEIGNLKNLVTLDMSSNNFIGFIPSSLGMLTSLLHMHLSDNYLTRQIPPEIGKLENLVIFDIAGNSLYGPIPLDIGNLKNLKELYIARNNLTSALPSTLANLSQLTTLDVSQNYLSGDIPSELGHINSLTHLGLGDNQLTGELPLAISNLTHLVMLNVSFNGIYGQIPKEIAKLENLVIFDITGNGLYSPIPLDIGKLKNLKELYIARNFIKGALPSTLANLSQLTALDVSHNDLSGGIPSELGHIDSLTHLFLGNNRFTGELPCAIANLTHLVMLNVSFNGIYGQIPNEISNWKNLVTLDLSSNNFFGSITSSLGHLNNLVTLDLSSNNLNGSIPSSFGNLKNLVTLNLNSNNLKGSIPSGLGCLKNLVTLDLSSNNFVPSILSSLCSLKNLVRLDLSSNNFNGSIPPCLVLLSRLSHMTLSDNFLTGEIPQEIGKLKKLETLDLNSNNLIRSIPCSLGNLRNLVTLDLSSNNLIGSIPSSLCNLKNLLRLDLSSNKFNGSIPSCLVLLSRLSYMKLSDNFLTGEVPQEIGKLENLTELDLSNNRLTGQILSDFYILSSLVTLNLSYNQISGSIPLEIASMSNLNCLDLSVNHLHGPILEEIGNLKKLSELNLSVNNFQGSIPLSLFELTFLRSLDLSTNQINGSINKKIENLRYLLNINLSNNNLSGEIPSDLCGRNHVDLSNNNFSGKVLAEFYSCYGTDASSSRTNSAKQSVKFFIIVPSCLFVLIGSSFVFLSKFKNIKSKDRKTKSGNLLSIWNYDGTIAYEDIIEATEDFDIRYCIGTGGYGSVYRAQLPSGKIVALKKLHRLESQEPSFDRSFRNELKMLTEIRHRNIIKLYGFCLHNRCRFLVYEYMERGSLHWALSNDDEAQELNWSKRVNIIKGIANALSYMHHDCTSTILHRDISSSNILLNSEMEAFVSDFGTARILDPESSNQTLLVGTIGYVAPELAYTLCVTEKCDVYSFGVVALETMMGKHPGELISSSRNSCPQDVLLKDVMDSRLPLPFLRKDAKDIVLVVTLAFSCLHTDPKSRPSMKDVVKEFLVSKPPLLQPFNDISIQQLINKESIYQ 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01422 1234 Pfam Protein kinase domain 945 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01422 1234 Gene3D Ribonuclease Inhibitor 33 185 IPR032675 -
Bach6g01422 1234 Gene3D Ribonuclease Inhibitor 449 548 IPR032675 -
Bach6g01422 1234 Gene3D Ribonuclease Inhibitor 330 448 IPR032675 -
Bach6g01422 1234 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1064 1076 IPR008266 GO:0004672|GO:0006468
Bach6g01422 1234 Pfam Leucine Rich repeat 122 136 IPR001611 GO:0005515
Bach6g01422 1234 Gene3D Ribonuclease Inhibitor 629 864 IPR032675 -
Bach6g01422 1234 SUPERFAMILY RNI-like 94 399 - -
Bach6g01422 1234 FunFam MDIS1-interacting receptor like kinase 2 1019 1213 - -
Bach6g01422 1234 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 655 876 - -
Bach6g01422 1234 ProSiteProfiles Protein kinase domain profile. 940 1215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01422 1234 Gene3D Phosphorylase Kinase; domain 1 901 1018 - -
Bach6g01422 1234 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Bach6g01422 1234 Pfam Leucine rich repeat 243 302 IPR001611 GO:0005515
Bach6g01422 1234 Pfam Leucine rich repeat 699 758 IPR001611 GO:0005515
Bach6g01422 1234 SUPERFAMILY RNI-like 307 638 - -
Bach6g01422 1234 Gene3D Ribonuclease Inhibitor 239 329 IPR032675 -
Bach6g01422 1234 Gene3D Transferase(Phosphotransferase) domain 1 1019 1212 - -
Bach6g01422 1234 SUPERFAMILY L domain-like 546 857 - -
Bach6g01422 1234 Gene3D Ribonuclease Inhibitor 186 238 IPR032675 -
Bach6g01422 1234 Gene3D Ribonuclease Inhibitor 551 624 IPR032675 -
Bach6g01422 1234 Pfam Leucine Rich Repeat 627 649 IPR001611 GO:0005515
Bach6g01422 1234 Pfam Leucine Rich Repeat 603 625 IPR001611 GO:0005515
Bach6g01422 1234 Pfam Leucine Rich Repeat 171 191 IPR001611 GO:0005515
Bach6g01422 1234 PRINTS Leucine-rich repeat signature 697 710 - -
Bach6g01422 1234 PRINTS Leucine-rich repeat signature 484 497 - -
Bach6g01422 1234 ProSiteProfiles Leucine-rich repeat profile. 603 626 IPR001611 GO:0005515
Bach6g01422 1234 FunFam Leucine-rich repeat receptor protein kinase MSP1 903 1018 - -
Bach6g01422 1234 ProSiteProfiles Leucine-rich repeat profile. 627 650 IPR001611 GO:0005515
Bach6g01422 1234 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 92 328 - -
Bach6g01422 1234 SUPERFAMILY Protein kinase-like (PK-like) 919 1207 IPR011009 -
Bach6g01422 1234 SMART LRR_typ_2 313 337 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 121 145 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 241 264 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 625 649 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 385 409 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 721 745 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 481 504 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 601 624 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 433 457 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 169 192 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 265 289 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 361 384 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 193 217 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 697 717 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 553 577 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 505 529 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 817 841 IPR003591 -
Bach6g01422 1234 SMART LRR_typ_2 769 793 IPR003591 -
Bach6g01422 1234 FunFam Leucine-rich receptor-like protein kinase family protein 547 644 - -
Bach6g01422 1234 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 329 546 - -
Bach6g01422 1234 ProSitePatterns Protein kinases ATP-binding region signature. 946 968 IPR017441 GO:0005524
Bach6g01422 1234 SMART LRR_sd22_2 529 555 - -
Bach6g01422 1234 SMART LRR_sd22_2 601 620 - -
Bach6g01422 1234 SMART LRR_sd22_2 625 651 - -
Bach6g01422 1234 SMART LRR_sd22_2 433 462 - -
Bach6g01422 1234 SMART LRR_sd22_2 697 717 - -
Bach6g01422 1234 SMART LRR_sd22_2 721 750 - -
Bach6g01422 1234 SMART LRR_sd22_2 793 819 - -
Bach6g01422 1234 SMART LRR_sd22_2 313 342 - -
Bach6g01422 1234 SMART LRR_sd22_2 121 147 - -
Bach6g01422 1234 SMART LRR_sd22_2 241 267 - -
Bach6g01422 1234 SMART LRR_sd22_2 481 507 - -
Bach6g01422 1234 SMART LRR_sd22_2 361 387 - -
Bach6g01422 1234 PANTHER LEUCINE RICH REPEAT KINASE 2 529 1212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01422 Bach-Chr6 16245228 16249416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01422 453 859 Receptor kinase-like Gene Family AT4G08850 34.951 2.15e-52 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach6g01422 Pkinase 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01422 - - msin:131257973 954.896