Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01419 ATGGCCATTCCAATCTCCACATTTATTTTGATAGTATTAGTGGTTTTCTTAGATGCCACCACTACTTGTAGCGGAATGCCAACATCTAAATATTCTCCATCCATGGTTAATGAAGAAGAAAGGGCTTTGCTCCAAAGCAATTGGTGGAGTGGCAAAAACTTCTCAAACCATTGCAAGGGGAATGGTATCGAGTGCAACGATGCTGGAAGCATCATAAAGATTTCAATTTTAACTTCCCGTTATCTGTCCTCTTTTCCACCACGGCTTCGAGACATGAACTGGACTGCATTCCCTAATTTAGTCAGTCTTGATCTGAGTGGGATCGGTCTATGGGGACCCATCCCTGAGAATATTGGTGCACTTTCAAAGCTCACCCATCTCAACATTTCCCATAATAATATCACGGGTAAGCTCCCTCCTATAATTGCAAATCTCACTCATCTTGTGATGCTTAATGTTTCTTTCAATAGCATCGATGGTCAGATTCCAGAAGAAATAGGGAAATTAGAAAATCTGGTGATATTTGACATTGCTGACAACTGGCTGGATGGTCCTATTCCTCTTGACATTGGAAATTTAAAGAACTTGAAAGAGCTATACATCGCGAGAAACGATCTCACTGGTACCCTACCTAGTACACTTGCCAACCTTTCTCAACTTACCACACTTGATGTCTCTCAGAATTATTTAAGTGGTGGCATCCCATCAGAATTGGGTCATGTAAACAATCTCACCCACCTGTTCCTCGGCGATAACCTATTAACAGGCGAGCTGCCTTGTGTAATTGCAAACCTCACTCACCATGTGATGCTTAATGTTTCTTTCAATGGTATCTATGGTCAGATTCCAAAAGAAATAAGCAATTGGAAGAAACTTGTGACACTGGACTTGAGTTCAAACGACTTCTTTGGATCAATCCCTTCTAGTTTGGGCAATCTGAAGAACCTTGTGACACTAGACTTGATTCACAACAACCTTAATGGATCAATCCCTTCTAGTTTGGGTAATTTGAAGAACCTTGTGACACTACAATTGAGTTATAACAACCTCATTGGATCTATCCCTTCTAGTTTGGGCAATTTGAAGAACCTTGTGACAGTAGACTTGATTCACAACAACCTTAATGGATCAATCCCTTCTAGTTTGGGTAATTTGCAGAACCTTGTGACACTACAATTGAGTCATAACAACCTCATTGGATCAATCCCTTCTAGTTTAGGCAATGTGATGAACCTTGTGACACTAGACTTGAGTTCAAACAACTTCATGGGATTAATCCCTTCTAGTTTGGGCAATTTGAAGAACCTTGTGTCACTAGACTTGAGTTCAAACAACTTCATGGGATTAATCCCTTCTAGTTTGGGCAATTTAAAGAACCTTGTGACACTAGACTTGATTTCAAACAACCTCAATGGATCAATCCCTTCTAGTTTGGGCAATTTGAAGAGCCTTACGACACTTTGCTTGTCAAATAATTTCTTAACAGGTGACATACCTCAAGAAATGGGGAACTTAAAGAACTTGATTCTGTTAGACCTTTCTAACAATAGACTCACTGGACAAATCCTTTCTGATTTTGGTATTTTATATAGTTTAAAAATTCTGAACCTTTCACACAACCAAATTAGTGGATCAATTCCCTTAGAAATAGCAAATCTGAGCAATTTAGAGTATCTAAACTTATCAAATAATAACTTGAGCGGTGAGATACCCTCTAACTTGTGTGGTAGACATTATTTTGATCTCAGCAACAATAACTTCAGTGCTAGGGTAATGTCAGGATTTTATTCTTGTTATGGGACTGATGCATCCAGTTCTAGAACCAACTCAGCAAAGAAATCAATGAAGTTTTTTATTATAGTACCAAGTTGCCTTTTCGTCCTAATTGGGTCGAGCTTCGTTTTTCTATCTAATTTAAAAAAGATCAAATTTAAAGATAGAAAAACAAAGAGCGGGAACTTGCTTTCAATATGGAACTATGATGGTACAATTGCATATGAAGATATTATTGAAGCAACTGAGGACTTTGACATCAAGTATTGCATCGGCACCGGAGGTTATGGTAGTGTCTATAGAGCACACCTTCCTAGTGGCCAAATTGTTGCACTAAAGAAACTCCACCGATTAGAGTCTCAAGAGCCATCTTTTGACAGAAGTTTCCGTAATGAGGTCGAAATGTTGACTGAAATCCGTCATAGAAACATTATCAAGCTATATGGCTTTTGTTTACACAACAGGTGCATGTTTCTGGTGTATGAGTATATGGAGAGAGGAAGCTTACTTTGGGCTTTGAGCAATGATGAGGAAGCTCAAGAGTTGAATTGGAGCAAAAGGGTGAACATTGTCAAAGGAATAGCGAATGCTTTATCTTATATGCATCATGATTATACTTCCACAATTCTCCACCGAGACATATCAAGTAGCAATATTTTGTTGAACTCTGAAATGGAGGCATTTGTCTCAGACTTTGGCACTGCAAGAATCCTTGATCCTGAATCATCTAATCAAACTCTAGTTGTCGAAACTATTGGATATGTTTCACCAGAGCTTGCATACACATTGTGCGTGACAGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGGCTTTAGAAACAATGATAGGAAAACATCCAGGAGAGTTGATATCCTCTTCAAGAAACTCATGTCCTCAAGATGTGCTGCTGAAAGATGTGTTGGACTCACGTCTCCCTCTTCCATTCTTTCGTAAAGATGCCAAAGACATTGTTCTTGTGGTGACACTTGCTTTCTCATGCCTGCATACTGATCCAAAATCTCGACCATCAATGAAAGATGTTGTCAAGGAGTTTCTTGTTTCCAAGCCACCATTGCTGCAACCTTTCAACGACATTTCCATTCAGCAGCTGATTAATAAAGAATCCATCTATCAGTAA 2913 0.3889 MAIPISTFILIVLVVFLDATTTCSGMPTSKYSPSMVNEEERALLQSNWWSGKNFSNHCKGNGIECNDAGSIIKISILTSRYLSSFPPRLRDMNWTAFPNLVSLDLSGIGLWGPIPENIGALSKLTHLNISHNNITGKLPPIIANLTHLVMLNVSFNSIDGQIPEEIGKLENLVIFDIADNWLDGPIPLDIGNLKNLKELYIARNDLTGTLPSTLANLSQLTTLDVSQNYLSGGIPSELGHVNNLTHLFLGDNLLTGELPCVIANLTHHVMLNVSFNGIYGQIPKEISNWKKLVTLDLSSNDFFGSIPSSLGNLKNLVTLDLIHNNLNGSIPSSLGNLKNLVTLQLSYNNLIGSIPSSLGNLKNLVTVDLIHNNLNGSIPSSLGNLQNLVTLQLSHNNLIGSIPSSLGNVMNLVTLDLSSNNFMGLIPSSLGNLKNLVSLDLSSNNFMGLIPSSLGNLKNLVTLDLISNNLNGSIPSSLGNLKSLTTLCLSNNFLTGDIPQEMGNLKNLILLDLSNNRLTGQILSDFGILYSLKILNLSHNQISGSIPLEIANLSNLEYLNLSNNNLSGEIPSNLCGRHYFDLSNNNFSARVMSGFYSCYGTDASSSRTNSAKKSMKFFIIVPSCLFVLIGSSFVFLSNLKKIKFKDRKTKSGNLLSIWNYDGTIAYEDIIEATEDFDIKYCIGTGGYGSVYRAHLPSGQIVALKKLHRLESQEPSFDRSFRNEVEMLTEIRHRNIIKLYGFCLHNRCMFLVYEYMERGSLLWALSNDEEAQELNWSKRVNIVKGIANALSYMHHDYTSTILHRDISSSNILLNSEMEAFVSDFGTARILDPESSNQTLVVETIGYVSPELAYTLCVTEKCDVYSFGVVALETMIGKHPGELISSSRNSCPQDVLLKDVLDSRLPLPFFRKDAKDIVLVVTLAFSCLHTDPKSRPSMKDVVKEFLVSKPPLLQPFNDISIQQLINKESIYQ 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01419 970 Gene3D Ribonuclease Inhibitor 506 591 IPR032675 -
Bach6g01419 970 Gene3D Ribonuclease Inhibitor 33 190 IPR032675 -
Bach6g01419 970 SUPERFAMILY Protein kinase-like (PK-like) 655 943 IPR011009 -
Bach6g01419 970 Gene3D Ribonuclease Inhibitor 428 505 IPR032675 -
Bach6g01419 970 ProSiteProfiles Leucine-rich repeat profile. 531 554 IPR001611 GO:0005515
Bach6g01419 970 Gene3D Ribonuclease Inhibitor 194 269 IPR032675 -
Bach6g01419 970 ProSiteProfiles Leucine-rich repeat profile. 555 577 IPR001611 GO:0005515
Bach6g01419 970 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Bach6g01419 970 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Bach6g01419 970 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Bach6g01419 970 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Bach6g01419 970 Gene3D Ribonuclease Inhibitor 270 427 IPR032675 -
Bach6g01419 970 Gene3D Phosphorylase Kinase; domain 1 638 754 - -
Bach6g01419 970 Gene3D Transferase(Phosphotransferase) domain 1 755 948 - -
Bach6g01419 970 FunFam LRR receptor-like serine/threonine-protein kinase 287 358 - -
Bach6g01419 970 PRINTS Leucine-rich repeat signature 553 566 - -
Bach6g01419 970 PRINTS Leucine-rich repeat signature 508 521 - -
Bach6g01419 970 FunFam Leucine-rich repeat receptor protein kinase MSP1 639 754 - -
Bach6g01419 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 359 612 - -
Bach6g01419 970 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Bach6g01419 970 FunFam Nuclear pore complex protein NUP107 29 187 - -
Bach6g01419 970 SUPERFAMILY L domain-like 171 303 - -
Bach6g01419 970 ProSitePatterns Tyrosine protein kinases specific active-site signature. 800 812 IPR008266 GO:0004672|GO:0006468
Bach6g01419 970 SUPERFAMILY RNI-like 127 576 - -
Bach6g01419 970 SMART LRR_sd22_2 481 507 - -
Bach6g01419 970 SMART LRR_sd22_2 529 550 - -
Bach6g01419 970 SMART LRR_sd22_2 193 219 - -
Bach6g01419 970 SMART LRR_sd22_2 361 387 - -
Bach6g01419 970 SMART LRR_sd22_2 241 267 - -
Bach6g01419 970 SMART LRR_sd22_2 553 576 - -
Bach6g01419 970 SMART LRR_sd22_2 121 147 - -
Bach6g01419 970 SMART LRR_sd22_2 433 459 - -
Bach6g01419 970 SMART LRR_sd22_2 313 339 - -
Bach6g01419 970 SMART LRR_typ_2 121 144 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 385 409 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 337 361 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 457 481 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 505 525 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 433 456 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 193 216 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 553 577 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 313 336 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 217 241 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 145 169 IPR003591 -
Bach6g01419 970 SMART LRR_typ_2 529 552 IPR003591 -
Bach6g01419 970 Pfam Leucine Rich Repeat 195 217 IPR001611 GO:0005515
Bach6g01419 970 Pfam Leucine Rich Repeat 555 575 IPR001611 GO:0005515
Bach6g01419 970 Pfam Protein kinase domain 680 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01419 970 PANTHER LEUCINE RICH REPEAT KINASE 2 239 948 - -
Bach6g01419 970 ProSiteProfiles Protein kinase domain profile. 676 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01419 970 FunFam MDIS1-interacting receptor like kinase 2 755 949 - -
Bach6g01419 970 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01419 Bach-Chr6 16165870 16169094 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01419 30 848 Receptor kinase-like Gene Family AT4G08850 37.638 4.05e-176 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach6g01419 Pkinase 6.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01419 - - qsu:111983689 861.677