Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01417 ATGGTTAATGAAGAAAAAAGGGCTTTGCTCCAAAGCATTTGGTGGAGTGGCAATAACTTCTCAAACCATTGCAAGTGGAATGGTATCGAGTGCAACGATGCTGGAAGCATCATAAAGATTTCAATTTTAACTTCCCGTTATCTGTCCTCTTCTCCACCACGGCTTCGAGACATGAACTGGACTGCATTCCCTAATTTAGTCAGTCTTGATCTGAGTGGAATTGATCTATGGGGACCAATCCCTGAGAATATTGGTGCACTTTCAAAGCTCACCCATCTCAACATTTCCAATAATAATATCACGGGTGCCTTACCTAGTACGCTTGCCAACCTTTCTCAACTTACCACACTTGATGTCTCTCAGAATTATTTAAGTGGTGGCATTCCAGCAGAATTGGGTCATATCAACAGTCTCACCCACCTGTTCCTCGGCGATAACCAATTAACAGGTGAGCTGTCTTGTGCAATTGCAAACCTCACTCACCACGTGATGCTTAATGCTTCTTTCAATGGTATCTATGGTCAGATTCCAAAAGAAATAAGCAATTGGAAGAACCTTGTGACACTAGACTTGAGTTCAAACAACTTCTTTGGATCAATTCCTTCTAGTTTGGGATATTTGACTAACCTTGTGACACTCGACTTGAGTTCACACATCTTCAATCACAACCTCAATGGATCAATCCCTTCTAGTTTGGGCAATTTGAAGAACCTTGTGGAACTACACTTGAGTTCAAACAACCTCAATGGATCAATCCCTTCTAGTTTTGGCAATTTGAAGAACCTTGTGGAACTACATTTGGATTCAAACAACCTCAATGGATCAATCCCTTCTAGTTTGGGCAATTTGAAGAACCTTGTGATAGTAGACTTGATGTCAAACAATCTCATTGGATCAATCCCTTCTAGTTTGGGCAATTTGAAGAACCTTGTGGAACTATACTTGAGTTCAAACAACCTCAATGGATCAATCCCTTCTAGTTTGGGCAATTTGAAGAACCTTGTGATACTATACTTGAGTTCAAACAACCTCATTGGATCAATCCCGTCTAGTTTGGGCAATTTGAAGAACCTTGTGGAACTATACTTGAGTTCAAACAACCTCAATGGATCAATCCCTTCTAGTTTGGGCAATTTGAAGAACCTTGTGATGCTAGACTTGAGTTCAAACAACTTTAATGGGTCCATTCCTTCTAGTTTGGTCCTTTTGTCCAGACTTGCCCAAATGAGTTTGTCGGATAATTTCTTAACAGGTGAGATACCTCAAGAAATAAGGAAATTAAAGAAATTGACTGAGTTAGACCTTTCTAACAATAGACTCACTGGACAAATCCTTTCTGATTTTGGTATTTTATCTAGTTTAATAACCTTGGACCTTTCAAACAACCAAATTAGTGGATCCATTCCCTTAGAAATAGCAAATCTGAGCAATTTAGAATCTCTAGATCTTAGTGTAAATCATCTCCACGGTTCCATTCCTCAAGAAATTGGAAATTTAAAGAACTTGAATGAGCTAAACCTTTATGTAAACAACTTCCAGGGTTCTATTCCTCTATCTTTCTTCGTTTTTCTATCTAAGTTTAAAAAGATCGAATCTAAAGATAGAAAAACAAAGCCCGGGAACTTGCTTTCAATATGGAACTATGATGGTACAATTGCATATAACGATATTATTGAAGCAACTGAGGACTTTGACATCAGGTATTGCATTGGCACCGGAGGTTATGGTAGTGTCTATAGAGCACAACTTCCTAGTGGCAAAATTGTTGCACTAAAGAAACTCCACCGATTAGAGTCTCAAGAGCCATGTTTTGACAGAAGTTTCCGTAATGAGGTCGAAATGTTGACCGAAATCCGTCATAGAAACATTATCAAGCTATATGGCTTTTGTTTACACAACAGCTTTGGAGTGGTGGCTCTAGAAACAATGATGGGAAAACATCCAGGAGAGTTGGTATCCTCTTCAAGAAATTCATGTCCTCAAGATGTGCTGTTGAAAGATTTCTTGGACTCACGTCTTCCTCTTCCATTCTTGCGTAAAGATGCCAAAGACATCGTTCTTGTGGTGACACTTGCTTTCTCATGCCTGCATACTGATCCGAAATCTCGACCATCAATGAAAGATGTTGTTAAGAAGTTTCTAGTTTTTAAGCCACCATTGCTGAAACCTTTCAATGACATTTCGATTCAGCAGTTGATTAATAAAGAATCCATCTATCGGTAA 2223 0.3896 MVNEEKRALLQSIWWSGNNFSNHCKWNGIECNDAGSIIKISILTSRYLSSSPPRLRDMNWTAFPNLVSLDLSGIDLWGPIPENIGALSKLTHLNISNNNITGALPSTLANLSQLTTLDVSQNYLSGGIPAELGHINSLTHLFLGDNQLTGELSCAIANLTHHVMLNASFNGIYGQIPKEISNWKNLVTLDLSSNNFFGSIPSSLGYLTNLVTLDLSSHIFNHNLNGSIPSSLGNLKNLVELHLSSNNLNGSIPSSFGNLKNLVELHLDSNNLNGSIPSSLGNLKNLVIVDLMSNNLIGSIPSSLGNLKNLVELYLSSNNLNGSIPSSLGNLKNLVILYLSSNNLIGSIPSSLGNLKNLVELYLSSNNLNGSIPSSLGNLKNLVMLDLSSNNFNGSIPSSLVLLSRLAQMSLSDNFLTGEIPQEIRKLKKLTELDLSNNRLTGQILSDFGILSSLITLDLSNNQISGSIPLEIANLSNLESLDLSVNHLHGSIPQEIGNLKNLNELNLYVNNFQGSIPLSFFVFLSKFKKIESKDRKTKPGNLLSIWNYDGTIAYNDIIEATEDFDIRYCIGTGGYGSVYRAQLPSGKIVALKKLHRLESQEPCFDRSFRNEVEMLTEIRHRNIIKLYGFCLHNSFGVVALETMMGKHPGELVSSSRNSCPQDVLLKDFLDSRLPLPFLRKDAKDIVLVVTLAFSCLHTDPKSRPSMKDVVKKFLVFKPPLLKPFNDISIQQLINKESIYR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01417 740 Gene3D Ribonuclease Inhibitor 453 526 IPR032675 -
Bach6g01417 740 SMART LRR_sd22_2 427 447 - -
Bach6g01417 740 SMART LRR_sd22_2 355 381 - -
Bach6g01417 740 SMART LRR_sd22_2 235 261 - -
Bach6g01417 740 SMART LRR_sd22_2 307 333 - -
Bach6g01417 740 SMART LRR_sd22_2 135 161 - -
Bach6g01417 740 SMART LRR_sd22_2 87 113 - -
Bach6g01417 740 SMART LRR_sd22_2 451 472 - -
Bach6g01417 740 SMART LRR_sd22_2 475 501 - -
Bach6g01417 740 FunFam Inactive leucine-rich repeat receptor-like protein kinase 299 533 - -
Bach6g01417 740 Gene3D Ribonuclease Inhibitor 375 452 IPR032675 -
Bach6g01417 740 Pfam Leucine Rich Repeat 333 355 IPR001611 GO:0005515
Bach6g01417 740 Pfam Leucine Rich Repeat 429 448 IPR001611 GO:0005515
Bach6g01417 740 Pfam Leucine Rich Repeat 185 205 IPR001611 GO:0005515
Bach6g01417 740 Gene3D Ribonuclease Inhibitor 152 219 IPR032675 -
Bach6g01417 740 Pfam Leucine rich repeat 89 148 IPR001611 GO:0005515
Bach6g01417 740 Pfam Leucine rich repeat 237 296 IPR001611 GO:0005515
Bach6g01417 740 FunFam Leucine-rich repeat receptor protein kinase EMS1 221 298 - -
Bach6g01417 740 Gene3D Ribonuclease Inhibitor 220 374 IPR032675 -
Bach6g01417 740 ProSiteProfiles Leucine-rich repeat profile. 453 476 IPR001611 GO:0005515
Bach6g01417 740 SMART LRR_typ_2 379 403 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 87 110 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 111 135 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 331 354 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 355 378 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 475 499 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 427 447 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 259 283 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 235 258 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 307 330 IPR003591 -
Bach6g01417 740 SMART LRR_typ_2 451 474 IPR003591 -
Bach6g01417 740 Pfam Protein kinase domain 569 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01417 740 SUPERFAMILY RNI-like 61 301 - -
Bach6g01417 740 SUPERFAMILY Protein kinase-like (PK-like) 553 712 IPR011009 -
Bach6g01417 740 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 532 632 - -
Bach6g01417 740 Gene3D Ribonuclease Inhibitor 2 151 IPR032675 -
Bach6g01417 740 SUPERFAMILY RNI-like 221 529 - -
Bach6g01417 740 ProSiteProfiles Protein kinase domain profile. 564 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01417 740 ProSitePatterns Protein kinases ATP-binding region signature. 570 592 IPR017441 GO:0005524
Bach6g01417 740 Gene3D Phosphorylase Kinase; domain 1 527 636 - -
Bach6g01417 740 FunFam Leucine-rich repeat receptor protein kinase MSP1 527 641 - -
Bach6g01417 740 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 56 220 - -
Bach6g01417 740 Gene3D Transferase(Phosphotransferase) domain 1 637 717 - -
Bach6g01417 740 PRINTS Leucine-rich repeat signature 430 443 - -
Bach6g01417 740 PRINTS Leucine-rich repeat signature 475 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01417 Bach-Chr6 16108836 16112024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01417 66 643 Receptor kinase-like Gene Family AT4G08850 35.449 8.29e-103 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach6g01417 Pkinase 5.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01417 - - qsu:111983689 576.63