Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01387 GGTTGAGCGACAATGGTATATGTCAAGGCTCAAAAGTCAAAAGCCTATTTCAAGAGATTCCAAGTCAAGTTTAAGAGAAGAAGAGAGGGTAAGACTGATTATAGAGCCCGAATTAGGCTGATCAACCAGGATAAGAACAAGTACAATACCCCAAAGTACAGATTTGTTGTTCGCTTGACAAATAAAGATATTATCGCCCAGATAACATCTGCCAGCATTGCTGGTGATATTGTACTAGCTTCTGCTTATGCCCATGAGCTGCCTAACTATGGTTTGAAAGTTGGACTCACAAACTATGCTGCTGCTTATTGCACTGGACTGCTTTTGGCTCGTAGAGTCCTTAAGACGCTTGAAATGGATGAGGAGTACGAGGGCAATGTGGAGGCTACTGGAGAGGACTTCTCAGTTGAGCCTGCTGAGGTCAGGAGGCCATTCCGTGCCCTTCTAGATGTTGGTCTTGTTAGGACTACAACTGGCAATCGTGTCTTTGGTGCCCTTAAGGGAGCTCTGGATGGGGGTCTTGATATTCCCCACAGTGATAAAAGGTTTGCTGGCTTTAACAAGGACAAGAAGGAACTTGATGCTGATGTTCACCGCAAATATATCCTTGGTGGCCATGTTGCTTCTTATATGAAGGCAAGATCAGACTCTTTAATTGATTCCTTTCATCTAGGGAAATGGACTTTACAAGAAGATGAGCCAGAAAAGTACCAAACACATTTTAGTGAATATATCAAGCAAGGGATCGATCCTGACAACCTTGAGGAGATGTACAAAAAGGTTCATGCTGCCATTCGTGCCGACCCTACTATGAGGAAGTTACAGAAGGAGCCCCCTAAGGAGCACAAGAGGTACAACCTCAAGAAGCTTACCTATGAGGAGAGAAAGGCCAAGTTGATTGCACATGTTCAGGCTCTCAACTCAGCTGTGGAAGATGATGAGGATGAAGATGACGAGTGA 960 0.4437 MVYVKAQKSKAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRLTNKDIIAQITSASIAGDIVLASAYAHELPNYGLKVGLTNYAAAYCTGLLLARRVLKTLEMDEEYEGNVEATGEDFSVEPAEVRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFNKDKKELDADVHRKYILGGHVASYMKARSDSLIDSFHLGKWTLQEDEPEKYQTHFSEYIKQGIDPDNLEEMYKKVHAAIRADPTMRKLQKEPPKEHKRYNLKKLTYEERKAKLIAHVQALNSAVEDDEDEDDE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01387 315 CDD Ribosomal_L18_L5e 41 170 - -
Bach6g01387 315 FunFam 60S ribosomal protein L5 1 306 - -
Bach6g01387 315 PANTHER RIBOSOMAL PROTEIN L5-RELATED 1 305 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bach6g01387 315 Hamap 50S ribosomal protein L18 [rplR]. 14 261 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bach6g01387 315 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 14 175 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bach6g01387 315 SUPERFAMILY Translational machinery components 11 266 - -
Bach6g01387 315 Gene3D - 1 306 - -
Bach6g01387 315 PRINTS Ribosomal protein L5 signature 144 163 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bach6g01387 315 PRINTS Ribosomal protein L5 signature 84 104 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bach6g01387 315 PRINTS Ribosomal protein L5 signature 43 62 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bach6g01387 315 PRINTS Ribosomal protein L5 signature 164 183 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bach6g01387 315 PRINTS Ribosomal protein L5 signature 20 39 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bach6g01387 315 Pfam Ribosomal L18 C-terminal region 250 303 IPR025607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01387 Bach-Chr6 15268980 15271277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01387 1 305 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 77.705 1.04e-176 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01387 K02932 - twl:120008476 498.434