Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01375 ATGGCCAAACTTCGCTTTGTTGTCTTTATTTTCGTCCTCTCATTGCAATACTTCATGGCTTGTAACTTGGCTACTCTCACCTCTGATCAATCTTCTCTTCTTGTATTTAAATCTTCTATGAATTTAAACACTCATGATCTGTTGGCCACTAATTGGTCAAATTCTTCTTCTTTGTGCAATTGGATTGGCATCACTTGTGATGCACGCCATGGAAGAGTTAAGGCCTTAAATCTCAGTAACATGGGCCTTACTGGTATCATACCCCCAGAACTGGGAAATCTCTCGTTTCTTGCTAAACTTGATCTTAGCTATAACAGTTTCCATGGAGAGCTACCAAATGAATTACATCGACTGCATAGAGTTAAGCTACTGAACTTGAGCTTCAATGGATTCAGTGGAGAGATTCCAACATGGATAGGAGGTTCATCTAATCTTCAACATTTGAGTCTACAGAGCAATAGTTTTGGTGGTCTTTTTCCACTATTCTTATTCAACATATCAAGGCTTGAGAACTTGGATTTGAGTTTTAATCAGATTGGTGGAACCATTCCATTTGAGATTGGCCAACTTCGTCAATTAAAGACTTTAAATATTGGAATGAACAAGCTTTCAGGGAGCATACCTACTGAAATCTTCAACATCTCTTCGTTGGAAGAAGTGAATTTAGCTTATAACTCGTTTTCAGTAGTGGTTCATTGTGACATGAAACCTAGCAATATTTTGTTAGATGAAAATATGGACGCACATGTTGGTGATTTTGGCATTGCCAAACTCTTAGATGAAGGACAATCTAAAACACATACTGATACTTTAGCAACACTCGGTTATATTGCACCAGAGTATGGATCTCAAGGAATTATTTCTGTAAAAGGAGATGTTTACAGTTATGGAATTTTGATGTTGGAAATATTCACAAGGACGAAGCCCACAGATGACATGTTTACAGCTGGATCAAACTTTAAAAGCTGGGTCACAAATTTGATGCCACATGTTGTACAAATTGTAGACCCCAATTTACTTCAACAAGAGGACCAGCAGTTTGATAAGATAATAACATATACATCAGCCATTTTGGAGTTGGCTCTCAATTGTTGTGCAGACTCGCCAGAAGCACGTATTGGTATGACAGATGTGGTTGTTTCATTGAATAAAATCAAGATGATGTTTCTGCAAAAGTAA 1179 0.3749 MAKLRFVVFIFVLSLQYFMACNLATLTSDQSSLLVFKSSMNLNTHDLLATNWSNSSSLCNWIGITCDARHGRVKALNLSNMGLTGIIPPELGNLSFLAKLDLSYNSFHGELPNELHRLHRVKLLNLSFNGFSGEIPTWIGGSSNLQHLSLQSNSFGGLFPLFLFNISRLENLDLSFNQIGGTIPFEIGQLRQLKTLNIGMNKLSGSIPTEIFNISSLEEVNLAYNSFSVVVHCDMKPSNILLDENMDAHVGDFGIAKLLDEGQSKTHTDTLATLGYIAPEYGSQGIISVKGDVYSYGILMLEIFTRTKPTDDMFTAGSNFKSWVTNLMPHVVQIVDPNLLQQEDQQFDKIITYTSAILELALNCCADSPEARIGMTDVVVSLNKIKMMFLQK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01375 392 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 230 386 - -
Bach6g01375 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Bach6g01375 392 Pfam Leucine Rich repeat 168 181 IPR001611 GO:0005515
Bach6g01375 392 Gene3D Transferase(Phosphotransferase) domain 1 222 390 - -
Bach6g01375 392 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 139 231 - -
Bach6g01375 392 SUPERFAMILY L domain-like 27 230 - -
Bach6g01375 392 SUPERFAMILY Protein kinase-like (PK-like) 230 387 IPR011009 -
Bach6g01375 392 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Bach6g01375 392 Pfam Protein kinase domain 229 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01375 392 FunFam Leucine-rich repeat receptor-like kinase 29 138 - -
Bach6g01375 392 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Bach6g01375 392 ProSiteProfiles Protein kinase domain profile. 85 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01375 392 SMART serkin_6 94 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01375 Bach-Chr6 14881077 14890164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01375 189 390 Receptor kinase-like Gene Family AT5G20480 32.864 7.60e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach6g01375 Pkinase 1.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01375 - K13420 ahf:112722956 291.197