Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01307 ATGACAAAGCAAGTAGCCAATGCCATTCTTCTAGCTTTGATTGTTTTCTTCAACAAAATTTCTGACATTGAAATGAGCAAAGATATACCAACCAGACCTAATGTTGTGAGTATCGGGGCTCTTTTCTCTTTCAATTCAACAATTGGCAAGGCTGCAAAAGTAGCAATAGCAGCTGCAGTTGATGATGTAAATTCTAATCTAAAGGTTCTTAATGGAACAAAGCTGAAAATTTCAATGCAGGATGCTAATCACAATGGCTTTCTAGGCATAATCAACGCTCTAAGGTTAATGGAGAATGATACAATGGCCATAATTGGCCCCCAGTTTTCTGTCTCAGCTCACACAATTTCACAGGTTGCAAATGAGCTCCAGGTCCCTCTTTTATCATTTGCAGCTACAGATCCCACCCTTTCATCCCTAGAGTTCCCATACTTTGTCAGAACAACACAGAGTGATCTCTTTCAGATGTCAGCAATTGCAGATATTGTAGATTACTATGAGTGGAGAGATGTCATAGCGATCTATGTTGATGATGATTATGGGAGAAATGGGATTGTTGCTTTAGGTGATAAGCTAGCTGAGAAAAGACGCAAGATATTGTATAAAGCACCTCTTAGTCCTAACATTAGCCGGTCTGACATAATTCGTGTTCTGAGTAAGCTAGCATCAATGGAGTCTAGGATTTTGATAGTCCATACATATCCAGATTTGGGACTAGAGGTTTTTGATGTAGCAAAAGACTTTGGGATGACGAATACTGGTTATGTTTGGATCACCACTGACTGGCTTTCCACTGTATTGGATGCTAATTCTGATCTTGCTGCAAAGGCCATTGATGACATTCAAGGTGTTCTTACGCTGCGTTCATACACGCCAGATTCTGAAATTAAAAGGAAACTTGTTTCCAGGTGGGAAAAATTAATTGGTGGAAAAACAGCTGGTGGTTCAGTAGGATTGAATACATATGGTTTATATGCCTATGACACTGTATGGCTTTTGGCTCAAGCAATTGATGAGTTTCTAACTCAGGGAACTAATGTTTCATTTTCAAGTGATTCAAGATTCAGCTTTTCAACCTTGTTCTCTTCTCAAAGAGAAAAGACAGTGAGCAATCTCAGTCGCTTTCTGCTTATAATATGGCTATTTGTGGTGCTAATACTGAACTCAACCTACACAGCAAGTTTGTCATCAATCCTTACAGTGGAGCAGCTATCTTCTACAATCAAAGGAATTGAGAGTTTACTCTCAAGCAACGACCCTATTGGTTACAATCGAGGTTCATTTTCTGAGAATTACTTAATTAATGAACTAAACATACAGCATTCAAGGCTTGTTCCTCTGAACTCACCAGAGGAGTTTGAAAAAGCTTTAATCAATGGTCCTGAGAAGGGTGGTGTTGCTGCATTGGTTGATGAACGTGTATATATGGAGATTTTCCTCTCTACCAGATGTGAATACAGCATAGTGGGCCAAGATTTCATGAAAATGGGCTGGGCATTCGCCTTCCAAAGGGATTCACCACTTGCAGTAGACATGTCAACTGCCATATTAAAGCTATCAGAAAATGGAGAACTCCAGAGGATTCGTGACAAATGGCTGAGACGAAGTGCTTGCATTACTCAAGGTGGGAAGCAAGAATTAGAGCGTCTTCCTCTTAAAAGCTTTCTTGGCCTATTTTTCATATGTGGATCAGCTTGCTTTCTTGCCCTCCTTGTGTACTTTATTCAGATGGTGTATAAGTTTATCAAACATAACTCAAACGAGTCTGAAAATTCAACTTTGAGATCAGGGTCTGATGTTCTTCGCTCATTTGCTTCATTTCTTGATGAAAAAGAAGAAATCATTGAAAGCAAATCAATGAGAAGGCAGATGGAGAGGTCCTCTGTTGAACTTTGA 1896 0.395 MTKQVANAILLALIVFFNKISDIEMSKDIPTRPNVVSIGALFSFNSTIGKAAKVAIAAAVDDVNSNLKVLNGTKLKISMQDANHNGFLGIINALRLMENDTMAIIGPQFSVSAHTISQVANELQVPLLSFAATDPTLSSLEFPYFVRTTQSDLFQMSAIADIVDYYEWRDVIAIYVDDDYGRNGIVALGDKLAEKRRKILYKAPLSPNISRSDIIRVLSKLASMESRILIVHTYPDLGLEVFDVAKDFGMTNTGYVWITTDWLSTVLDANSDLAAKAIDDIQGVLTLRSYTPDSEIKRKLVSRWEKLIGGKTAGGSVGLNTYGLYAYDTVWLLAQAIDEFLTQGTNVSFSSDSRFSFSTLFSSQREKTVSNLSRFLLIIWLFVVLILNSTYTASLSSILTVEQLSSTIKGIESLLSSNDPIGYNRGSFSENYLINELNIQHSRLVPLNSPEEFEKALINGPEKGGVAALVDERVYMEIFLSTRCEYSIVGQDFMKMGWAFAFQRDSPLAVDMSTAILKLSENGELQRIRDKWLRRSACITQGGKQELERLPLKSFLGLFFICGSACFLALLVYFIQMVYKFIKHNSNESENSTLRSGSDVLRSFASFLDEKEEIIESKSMRRQMERSSVEL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01307 631 FunFam Glutamate receptor 430 537 - -
Bach6g01307 631 Gene3D - 391 532 - -
Bach6g01307 631 Pfam Ligand-gated ion channel 345 565 IPR001320 GO:0015276|GO:0016020
Bach6g01307 631 FunFam Glutamate receptor 151 308 - -
Bach6g01307 631 Pfam Bacterial extracellular solute-binding proteins, family 3 391 533 IPR001638 -
Bach6g01307 631 Gene3D - 54 353 - -
Bach6g01307 631 SUPERFAMILY Periplasmic binding protein-like II 390 536 - -
Bach6g01307 631 SUPERFAMILY Periplasmic binding protein-like I 32 351 IPR028082 -
Bach6g01307 631 SMART GluR_14 337 535 IPR001320 GO:0015276|GO:0016020
Bach6g01307 631 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 49 65 - -
Bach6g01307 631 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 326 338 - -
Bach6g01307 631 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 109 137 - -
Bach6g01307 631 Gene3D - 151 318 - -
Bach6g01307 631 Gene3D - 394 502 - -
Bach6g01307 631 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 354 590 IPR015683 -
Bach6g01307 631 Pfam Receptor family ligand binding region 54 344 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01307 Bach-Chr6 12892257 12896651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01307 355 625 Ion Channels AT3G51480 63.869 2.51e-110 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01307 K05387 - jre:108984273 431.409