Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01306 ATGACAAAGCAAGTAGCCAATGCCATTCTTCTAGCTTTGATTGTTTTCTTCAACAAAATTTCTGACACTGAAATGAGCAAAGATATACCCACCAGACCTAATGTTGTGAGTATCGGGGCTCTTTTCTCTTTCAATTCTACAATTGGCAAGGCTGCAAAAGTAGCAATAGCAGCTGCAGTTGATGATGTAAATTATAGTCTAAAGGTTCTTAATGGAACAAAGCTGAAAATTTCAATGGAGGATGCTAATCATAATGGCTTTCTAGGCATAATCAACGCTCTAAGGTTAATGGAGAATGATACAATGGCCATAATTGGCCCCCAGTTTTCTGTCTCAGCTCGCACAATTTCACAGGTTGCAAATGAGCTCCAGGTCCCTCTTTTATCATTTGCAGCTACAGATCCCACCCTTTCATCCCTAGAGTTCCCATACTTTGTCAGAACAACACAGAGTGATCTCTTTCAGATGTCAGCAATTGCAGATATTGTAGATTACTATGAGTGGAGAGATGTCATAGCGATCTATGTTGATGATGATTATGGGAGAAATGGGATTGCTGCTTTAGGTGATAAGCTAGCTGAGAAAAGACGCAAGATATTGTATAAAGCACCTCTTAGTCCTAACATTAGCCGGTCTGACATAATTCATGTTCTGAGTAAGCTAGCATCAATGGAGTCTAGGATTTTGATAGTCCATACATATCCAGATTTGGGACTAGAGGTTTTTGATGTAGCAAAAGACTTTGGGATGACGAATACTGGTTATGTTTGGATCACCACTGACTGGCTTTCCACTGTATTGGATGCTAATTCTGATCTTGCTGCAAAGGCCATTGATGACATTCAAGGTGTTCTTACGCTGCGTTCATACACACCAGATTCTGAAATTAAAAGGAAACTTGTTTCCAGGTGGGAAAAATTAATTGGTGGAAAAACAGCTGGTGGTTCAATAGGATTGAATACATATGGTTTATATGCCTATGACACTGTATGGTTTTTGGCTCAAGCAATTGATGAGTTTCTAACTCAGGGAACTAATGTTTCATTTTCAAGTGATTCAAGATTCAGCTTTTCAACCTTGTTCTCTTCTCAAAGAGAAAAGACAGTGAGCAATCTTAGTCCATTTCTGCTTATAATATGGCTATTTGTGGTGCTAATACTGAACTCAACCTACACAGCAAGTTTGTCATCAATCCTTACAGTGGAGCAGCTATCTTCTACAATCAAAGGAATTGAGACTTTACGCTCAAGCAACGACCCTATTGGTTACCATAGAGGTTCATTTTCTGAGAATTACCTAACTAATGAACTAAACATACAGCATTCAAGGCTTGTTCCTCTGAACTCACCAGAGGAGTTTGAAAAAGCTTTAATCAATGGTCCTGAGAAGGGTGGTGTGGCTGCATTGGTTGATGAACGTGTATATATGGAGATTTTCCTCTCTACCAGATGTGAATACAGCATAGTGGGCCAAGATTTCATGAAAATGGGCTGGGCATTCGCCTTCCCAAGGGATTCACCACTTGCAGTAGACATGTCAGCTGCCTTATTAAAGCTATCAGAGAATGGAGAACTCCAGAGGATTCGTGACAAATGGCTGAGACGAAGTGCTTGCATTACTCAAGGTGGGAAGCAAGAATTAGAGCGCCTTCCTCTTAATAGCTTTCTTGGCCTATTTTTCATATGTGGATCAGCTTGCTTTCTTGCCCTCCGTGTGTACTTGATTCAGATGGTGTATAAGTTTATCAAACATAACTTAAACGAGTCTCAAACTTCTTCTACTTTGAGATCAGGGCCTGAAGTTCTTCGCTCATTTGCTTCCTTTCTTGACGAAAAAGAAGAAATCATTGAAAGCAAATCAATGAAAAGGCAGATGGAGAGGTCCTCTGTGAACTTTGAGATTTTTCTAGTTGTGTTAAACTACGAAGATCTTTTTCTTTTTTTTTTGGTTTTTTCTAGTTTTGTTCATGTAGAATATGTAATATAA 1986 0.3922 MTKQVANAILLALIVFFNKISDTEMSKDIPTRPNVVSIGALFSFNSTIGKAAKVAIAAAVDDVNYSLKVLNGTKLKISMEDANHNGFLGIINALRLMENDTMAIIGPQFSVSARTISQVANELQVPLLSFAATDPTLSSLEFPYFVRTTQSDLFQMSAIADIVDYYEWRDVIAIYVDDDYGRNGIAALGDKLAEKRRKILYKAPLSPNISRSDIIHVLSKLASMESRILIVHTYPDLGLEVFDVAKDFGMTNTGYVWITTDWLSTVLDANSDLAAKAIDDIQGVLTLRSYTPDSEIKRKLVSRWEKLIGGKTAGGSIGLNTYGLYAYDTVWFLAQAIDEFLTQGTNVSFSSDSRFSFSTLFSSQREKTVSNLSPFLLIIWLFVVLILNSTYTASLSSILTVEQLSSTIKGIETLRSSNDPIGYHRGSFSENYLTNELNIQHSRLVPLNSPEEFEKALINGPEKGGVAALVDERVYMEIFLSTRCEYSIVGQDFMKMGWAFAFPRDSPLAVDMSAALLKLSENGELQRIRDKWLRRSACITQGGKQELERLPLNSFLGLFFICGSACFLALRVYLIQMVYKFIKHNLNESQTSSTLRSGPEVLRSFASFLDEKEEIIESKSMKRQMERSSVNFEIFLVVLNYEDLFLFFLVFSSFVHVEYVI 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01306 661 FunFam Glutamate receptor 151 308 - -
Bach6g01306 661 FunFam Glutamate receptor 430 537 - -
Bach6g01306 661 SUPERFAMILY Periplasmic binding protein-like I 32 351 IPR028082 -
Bach6g01306 661 Gene3D - 54 352 - -
Bach6g01306 661 Pfam Receptor family ligand binding region 54 344 IPR001828 -
Bach6g01306 661 Pfam Bacterial extracellular solute-binding proteins, family 3 391 533 IPR001638 -
Bach6g01306 661 SMART GluR_14 337 535 IPR001320 GO:0015276|GO:0016020
Bach6g01306 661 Pfam Ligand-gated ion channel 345 565 IPR001320 GO:0015276|GO:0016020
Bach6g01306 661 Gene3D - 151 318 - -
Bach6g01306 661 Gene3D - 394 502 - -
Bach6g01306 661 SUPERFAMILY Periplasmic binding protein-like II 390 536 - -
Bach6g01306 661 Gene3D - 391 532 - -
Bach6g01306 661 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 354 592 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01306 Bach-Chr6 12873462 12877951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01306 355 631 Ion Channels AT3G51480 62.366 6.93e-110 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01306 K05387 - cave:132170723 425.631