Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01305 ATGACTAAGCAAGTAGCCAATGCCATTCTTCTAGCTTTGATTGTTTTCTTCAACAAAATTTCTGACACTGAAATGAGCAAAGATATACCAACCAGACCTGATGTTGTCAGTATCGGGGCTCTTTTCTCTTTCAATTCTACAATTGGCAAGGCTGCAAAAGTAGCAATAGCAACTGCAGTTGATGATGTAAATTATAGTCTAAAGGTTCTTAATGGAACAAAGCTGAAAATTTCAATGCAGGATGCTAATCATAATGGCTTTCTAGGCATAATCAAGGCTCTAAGGTTAATGGAGAATGATATAATGGCCATAATTGGCCCCCAGTTTTCTGTCTCAGCTCACACAATTTCACAGGTTGCAAATGAGCTCCAGGTCCCTCTTTTATCATTTGCAGCTACAGATCCCACCCTTTCATCCCAAGAGTTCCCATACTTTGTTAGAACAACACAGAGTGATCTCTTTCAGATGTCAGCAATTGCAGATATTGTAGATTACTATGAGTGGAGAGATGTCATAGCAATCTATGTTGATGATGATTATGGGAGAAATGGGATTGCTGCTTTAGGGGATAAGCTAACTGAGAAAAGATGCAAGATATTGTATAAAGCACCTCTCAGTCCTATCATGAACCGGTTTGACATAATTCATGTTCTGAGTAAGCTAGCATCTATGGAGTCCAGGGTTTTTATACTTCATACATATGCAGATTTGGGTCTAGAGGTTTTTGATGTTGCAAAAGACTTTGGGATGATGAGTGCTGGTTATGTTTGGATCACCACTGATTGGCTTTCCACTGTATTAGATACTAATTCTAATCTCGCTACCAGGGCCATCGATGGTATTCAAGGTGTTCTTACCCTGCGCATATACACCCCAGATTCTGATATTCGAAGGAAACTTGTTTCCCGGTGGGGAAGATTAACTGGTGGAAAGTCAGCTAGTGGTTCAGTAGGATTGAATGCATATGGTTTATATGCCTATGACACTGTATGGCTTTTGGCTCAAGCAATTGATGAGTTTCTAACTCAGGGAACTCATATTTCATTTTCAAGTGATTCAAAATTCAGCTTTTCAACCTTGTTCTCTTCTCAAAGAGAAAAGACAGTGAGCAATCTTAGTCGCTTTCTGCTTATAATTTGGCTATTTGTGGTGCTAATACTGAACTCAACCTACACAGCAAGTTTGTCATCAATCCTTACAGTGGAGCAGCTATCTTCTACAATCAAAGGAATTGAGAGTTTACTCTCAAGCAACGACCCTATTGGTTACCTTAGAGGTTCATTTTCTGAGAATTACTTAACTAATGAACTAAACATACAGCATTCAAGGCTTGTTCCTCTGAACACACCAGAGGAGTATGAAAAAGCTTTAATCAATGGTCCTGAGAAGGGTGGTGTTGCTGCATTGGTTGATGATCGTGAATATATGGAGATTTTCCTCTCTACCAGATGTGAATACGGTATAGTGGGCCAAGATTTCATGAAAATGGGCTGGGCATTCGCCTTCCAAAGGGATTCACCACTTGCAGTAGACATGTCAACTGCCATATTAACGCTATCAGAGAATGGAGAACTCCAGAGGATTCGTGACAAATGGCTGAGACGAAGTGCTTGCATTACTCAAGGTGGGAAGCAAGAATTAGAGCGTCTTCCTCTTAAAAGCTTTCTTGGCCTATTTTTCATATGTGGATCAGCTTGCTTTCTTGCCCTCCTTGTGTACTTGATTCAGATGGTGTATAAGTTTATCAAACATAACTTAAACGAGTCTCAAACTTCTTCTACTTTGAGATCAAGGCCTGAAGTTCTTCGCTCATTTGCTTCATTTCTTGATGAAAAAGAAGAAATCATTGAAAACAAATCAATGAGAAGGGAGATGGAGAGGTCCTCTGTTGAACTTTGA 1899 0.3971 MTKQVANAILLALIVFFNKISDTEMSKDIPTRPDVVSIGALFSFNSTIGKAAKVAIATAVDDVNYSLKVLNGTKLKISMQDANHNGFLGIIKALRLMENDIMAIIGPQFSVSAHTISQVANELQVPLLSFAATDPTLSSQEFPYFVRTTQSDLFQMSAIADIVDYYEWRDVIAIYVDDDYGRNGIAALGDKLTEKRCKILYKAPLSPIMNRFDIIHVLSKLASMESRVFILHTYADLGLEVFDVAKDFGMMSAGYVWITTDWLSTVLDTNSNLATRAIDGIQGVLTLRIYTPDSDIRRKLVSRWGRLTGGKSASGSVGLNAYGLYAYDTVWLLAQAIDEFLTQGTHISFSSDSKFSFSTLFSSQREKTVSNLSRFLLIIWLFVVLILNSTYTASLSSILTVEQLSSTIKGIESLLSSNDPIGYLRGSFSENYLTNELNIQHSRLVPLNTPEEYEKALINGPEKGGVAALVDDREYMEIFLSTRCEYGIVGQDFMKMGWAFAFQRDSPLAVDMSTAILTLSENGELQRIRDKWLRRSACITQGGKQELERLPLKSFLGLFFICGSACFLALLVYLIQMVYKFIKHNLNESQTSSTLRSRPEVLRSFASFLDEKEEIIENKSMRREMERSSVEL 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01305 632 Pfam Bacterial extracellular solute-binding proteins, family 3 391 533 IPR001638 -
Bach6g01305 632 Gene3D - 54 354 - -
Bach6g01305 632 Pfam Receptor family ligand binding region 54 344 IPR001828 -
Bach6g01305 632 Gene3D - 391 532 - -
Bach6g01305 632 SUPERFAMILY Periplasmic binding protein-like I 32 346 IPR028082 -
Bach6g01305 632 SMART GluR_14 354 535 IPR001320 GO:0015276|GO:0016020
Bach6g01305 632 Gene3D - 394 502 - -
Bach6g01305 632 Gene3D - 151 318 - -
Bach6g01305 632 SUPERFAMILY Periplasmic binding protein-like II 390 536 - -
Bach6g01305 632 Pfam Ligand-gated ion channel 345 565 IPR001320 GO:0015276|GO:0016020
Bach6g01305 632 FunFam Glutamate receptor 151 306 - -
Bach6g01305 632 FunFam Glutamate receptor 430 537 - -
Bach6g01305 632 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 354 593 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01305 Bach-Chr6 12808320 12812714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01305 355 626 Ion Channels AT3G51480 62.774 1.34e-108 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01305 K05387 - jre:108984273 442.58