Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01302 ATGCAGGATGCTAATCATAATGGCTTTCTAGGCATAATCAAAGCTCTAAGGTTAATGGAGAATGATACAATGGCCATAATTGGCCCCCAGTCTTCTGTCTCGGCTCACACAATTTCACAGGTTGCAAATGAGCTCCAGGTCCCTCTTTTATCATTTGCAGCCACTGATCCCAGCCTTTCTTCCCTAGAGTTCCCATACTTTATTAGAACAACACAGAGTGATCTCTTTCAGATGTCAGCAATAGCAGATATAGTAGACTACTATGAGTGGAGAGATGTCATAGCAATCTATGTTGAGGATGATTATGGGAGAAATGGGATTGCTGTTTTAGGGGATAAGCTAGCTGAAAAAAGAAGCAAGATATTGTATAAAGCGCCTCTTAGTCCTAACATGAGCCGGTCTGACATAATTCCTGTTCTGAGTAAGCTAGCATCAATGGAGTCTAGGGTTTTGATACTTCATACATATGCAGATTTGGGTCTAGAGGTTTTTGATGTTGCAAAAGAATTTGGGATGATGAATGCTGGTTATGTTTGGATCACCACTGACTGGCTTTCCACTGTACTGGATGCTAGTTCTGATCTTGCTACAAGGGCTATTGATGGCATTCAAGGTGTTCTTACGTTGCGCATATACACCCCAGATTCTGAAATTAAAAGAAAACTTCTTTCCAGGTGGAAAAGGTTAACTAATGGAAAGTCAGCTGGTGGTTCTGTAGGATTGAATGCATATGGTTTATATGCCTATGACACTGTATGGCTTCTGGCTCAAGCAATTGAAGAGCTTCAAACTCAAGGAACTCGTATTTCATTTTCAAGTGATTCAAAGTTCAGCTTTTCAACCTTGTTCTCTTCTCAAAGAGAGCAGACAGTGAGCAATGTTGGTCGCTTTCTGCTTATAATATGGCTATTTGTGGTGCTAATACTGAATTCAACCTACACAGCAAGTTTGTCCTCAATCCTTACAGTGGAGCAGCTATCTTCTACAGTCAAAGGAATTGAGAGTTTACTCTCAAGCAACGACCCTATTGGTTACCATAAAGCTTCATTTGCTGTGAATTACTTAACTAATGAACTAAACATACAGCATTCAAGGCTTGTTCCTCTGAACTCACCAGAGGAGTTTGAAAAAGCTTTGATCAATGGTCCTGAGAAGGGTGGTGTTGCTGCATTGATTGATGAACGTGTATATATGGAGCTTTTCCTTTCTACTAGATGTGAATTCAGCATAGTAGGCCCTGATTTCATGAAGATCGGTTGGGCATTGGCCTTTCAAAGGGATTCACCACTTGCAGTAGACATGTCAACAGCCATATTAAAGCTCTCAGAGAATGGAGAACTCCAGAGGATTCGTGACAAATGGCTTAGACGAAGTGCTTGTACCACGCAGGGAGGGAAGCAAGAACTAGAGCGTCTTCCTCTTAAGAGCTTTCTTGGTCCATTTTTCATATGCGGATCAGCTTGCATTCTTGCCCTTCTTGTGTACTTGATTCAGATGGTTCATAAGTTTATCAAACATAGTAAGTCTCAATCTTCTACTTTGAGGTCATCTGGGTCTTCAGTTCTTCGTTCATTTGCTTCATTTCTTGATGAAAAAGAAGGAATCAATAAAGCAAACCAGCAAAACAGTGAGAAGACAGATGGAGAGGTCCTCTGTTGAACTTCGAGATTTTTCTAGTTGTTAGAAATGTGTATTTAGCTGTGAGGTTTTGACGTTGCTTTGTATGTGAGAAAACTATCCATGTTGAATGGAAC 1754 0.4059 MQDANHNGFLGIIKALRLMENDTMAIIGPQSSVSAHTISQVANELQVPLLSFAATDPSLSSLEFPYFIRTTQSDLFQMSAIADIVDYYEWRDVIAIYVEDDYGRNGIAVLGDKLAEKRSKILYKAPLSPNMSRSDIIPVLSKLASMESRVLILHTYADLGLEVFDVAKEFGMMNAGYVWITTDWLSTVLDASSDLATRAIDGIQGVLTLRIYTPDSEIKRKLLSRWKRLTNGKSAGGSVGLNAYGLYAYDTVWLLAQAIEELQTQGTRISFSSDSKFSFSTLFSSQREQTVSNVGRFLLIIWLFVVLILNSTYTASLSSILTVEQLSSTVKGIESLLSSNDPIGYHKASFAVNYLTNELNIQHSRLVPLNSPEEFEKALINGPEKGGVAALIDERVYMELFLSTRCEFSIVGPDFMKIGWALAFQRDSPLAVDMSTAILKLSENGELQRIRDKWLRRSACTTQGGKQELERLPLKSFLGPFFICGSACILALLVYLIQMVHKFIKHSKSQSSTLRSSGSSVLRSFASFLDEKEGINKANQQNSEKTDGEVLC 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01302 552 Gene3D - 12 79 - -
Bach6g01302 552 PRINTS Metabotropic glutamate GPCR signature 58 77 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach6g01302 552 PRINTS Metabotropic glutamate GPCR signature 26 52 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach6g01302 552 PRINTS Metabotropic glutamate GPCR signature 93 110 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach6g01302 552 PRINTS Metabotropic glutamate GPCR signature 77 93 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bach6g01302 552 Gene3D - 237 365 - -
Bach6g01302 552 Pfam Receptor family ligand binding region 3 266 IPR001828 -
Bach6g01302 552 SUPERFAMILY Periplasmic binding protein-like II 312 458 - -
Bach6g01302 552 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 276 517 IPR015683 -
Bach6g01302 552 FunFam Glutamate receptor 352 459 - -
Bach6g01302 552 Pfam Ligand-gated ion channel 264 487 IPR001320 GO:0015276|GO:0016020
Bach6g01302 552 Gene3D - 396 462 - -
Bach6g01302 552 Gene3D - 80 234 - -
Bach6g01302 552 FunFam Glutamate receptor 73 229 - -
Bach6g01302 552 SMART GluR_14 248 457 IPR001320 GO:0015276|GO:0016020
Bach6g01302 552 SUPERFAMILY Periplasmic binding protein-like I 2 268 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01302 Bach-Chr6 12714370 12718566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01302 277 538 Ion Channels AT3G51480 62.264 1.47e-104 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01302 K05387 - cave:132172689 369.777