Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01272 TTCACACTGATATATTCCCTGTTTCTCTTCTATTCTCTGAACCAATTCATCTCTGGTTAAAGTCAAATCAGCGGGCTCTGATCCACCGATCACATGGCAAAACCAGGGGTGGGGTATTCTGATCCGCCGTCGGCGGCGGCGAAGATGATAGAGTTGAAGAAGGAGTTGCAGAGGTTGGTGAAGTCTATTGTTGATGATGAGGATTGCAGCACTGAAACCATTGATCAAGCTAAGGAAACTTTGTCTCTGCTAAAGGACTTGAAGCTGAGAAAGAGATCATCTTCAATGTCTTTGGAGCTTCACAAAACTGTGCCTTGCCCGGAGGAATTCAAGTGCCCTCTTTCTAAGGAATTGATGAGAGATCCTGTCATTGTGGCCTCTGGAAAGACATATGACAGATCATTCATTCAACAATGGCTGAAAGCAGGAAACAGGACTTGCCCACAAACCCGACAAGTCCTCTCACACACTTTGCTCACTCCTAACCACCTAGTTTGCAAGATTATACAACAATGGTGTAAAAACCAAGGGATTAACTCGTCCAGTTCCAATTCTGTTCACTGCACTGATGAGGAAAGGATAACTGATACTGACTGCGACCAATTTCTCTCGTTGCTGGAGAAACTATCTTCAGATTCTTCAGCTCTCTCTGAACAGAAAGCATCTGCGAAGGAGATCCGGCTGCTGACAAAGAAAATGCCATCTTTCAGGGTAATTTTTAGTGAATTTGAGGATGCAATTCCTCAATTGCTTAAACCACTCTCAAAAAATGGCTCTTTTAGTGACACTCACCATGATCTGCAAGAAGATGTGATCACAACACTGCTTAACATCTCAATCCATGACAACAACAAGAAGCTAGTTGCTGAGACTGAAATGGTGATTCCAATTCTTATGAAGGCCTTGGGAACAGGAACAATTGCAACCAGAAGCAATTCAGCAGCAGCACTTTTCACCTTATCAGCTCTTAACTCAAACAAAGAGCTTATAGGCAAATCAGGTGCCTTGAAGCCACTGATTGACCTCTTAGAAGAAGGGCATGCTTTGGCAATGAAAGATGTTGCTTCAGCAATTTTCTCCCTTTGTGTTCTCCATGAGAACAAGGCAAGAGCTGTGAGAGATGGTGCAGTGAGGGTGATTCTAGAAAAGATCAAGAACCGGGTTTATGTCGATGAACTGCTCGCAATTCTGGCATTGCTTTCTACTCATCAGAAGGCTGTTCAGGAAATGGGAGAGATTGGAGTAGTTCCTTGCTTGCTAAGCATTATCAGAGAAAGCAGCTGTGAACGCAACAAGGAGAATTGCATAGCAATTCTGCAGACTGTCTGTTTGTATGACAGAACAAAGTTGAAGGAAATAAAGGAAGAAGAAAGCAGTTACAGAACAATATCTCAGCTTGCTCAGAGTGGAACTTCAAGGGCTAAAAGGAAAGCCAGTGCTGTGATTGAGAGATTAAACAGGGCTGTTAATATCACACACACTGCATAA 1488 0.4315 MAKPGVGYSDPPSAAAKMIELKKELQRLVKSIVDDEDCSTETIDQAKETLSLLKDLKLRKRSSSMSLELHKTVPCPEEFKCPLSKELMRDPVIVASGKTYDRSFIQQWLKAGNRTCPQTRQVLSHTLLTPNHLVCKIIQQWCKNQGINSSSSNSVHCTDEERITDTDCDQFLSLLEKLSSDSSALSEQKASAKEIRLLTKKMPSFRVIFSEFEDAIPQLLKPLSKNGSFSDTHHDLQEDVITTLLNISIHDNNKKLVAETEMVIPILMKALGTGTIATRSNSAAALFTLSALNSNKELIGKSGALKPLIDLLEEGHALAMKDVASAIFSLCVLHENKARAVRDGAVRVILEKIKNRVYVDELLAILALLSTHQKAVQEMGEIGVVPCLLSIIRESSCERNKENCIAILQTVCLYDRTKLKEIKEEESSYRTISQLAQSGTSRAKRKASAVIERLNRAVNITHTA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01272 464 PANTHER U BOX DOMAIN-CONTAINING 16 454 - -
Bach6g01272 464 SUPERFAMILY ARM repeat 166 454 IPR016024 -
Bach6g01272 464 ProSiteProfiles U-box domain profile. 74 148 IPR003613 GO:0004842|GO:0016567
Bach6g01272 464 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 148 IPR013083 -
Bach6g01272 464 FunFam RING-type E3 ubiquitin transferase 74 148 - -
Bach6g01272 464 FunFam RING-type E3 ubiquitin transferase 161 460 - -
Bach6g01272 464 CDD RING-Ubox_PUB 76 128 IPR045210 -
Bach6g01272 464 SUPERFAMILY RING/U-box 73 146 - -
Bach6g01272 464 Gene3D - 151 459 IPR011989 -
Bach6g01272 464 SMART Ubox_2 78 141 IPR003613 GO:0004842|GO:0016567
Bach6g01272 464 Pfam U-box domain 76 145 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01272 Bach-Chr6 12113673 12116201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01272 137 464 U-box Gene Family AT3G07360 60.303 2.89e-129 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01272 - - gmx:100777031 630.943