Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01190 ATGCCAGCGGCCGAAACTAGCCGAAAATTAGCCGGCTGGACCCTCGACGACGTATTAGCCAACCAAAAAAGAGGAGCGGCGCCAACGCAGTCCAATCAGCCAAGCCAACAGACACTTCTAGACATCATAAGAGAGGACAACTCCAACAAAAAGGATAGAAAGACTTGGAAAACCTTCAAGGACAAGCTTCGGCTTAAGCGTGCCGGATCTGCTTGGACCTCTTCCATCCATATTCCAGCTTCGGATATCCCTAACCCTAGAAAGTCTAACAACAACAGCAGAGCCCAGTCCCGGATCTCGCAAAAAAAGACAGTTCGACCCTCCAACCTTGACATGTCAACTCATCCCATGGATTCTCGCCAAGTCGAAGACTTAGACCCAACAGATCCGATAGTCCGACCCCAGTTCACGCGTCGGGTCTCCTCTCGTTACGAAGGTGATTCCTCCGAGAATAAACTGAAACCCTCAATTTCGCGCCACAACTCCAACCGCATGATAGGGCGTACCGAGTCAACCCGCCGAGAACGCGCGGTGACATTCCGAGAGCCCTACGACAGCGATGAGGGTGAATCCGACGACGACGACGAGCATGATTCGACAAAACCATCAAGAGAAGTTAGAACTTTATCAGCCAGAGAGGCAGTGGCAGCTCAGGAAGCCGCAGAGGCAGCAGCAGCGGCAGCGGCAGCAGCTGCGGAGGAAGAGGAGGCGGGTGAAGGAGTTGCAGATATTGCCGGGGCAGAGCCGGTGACTATGTCGCTGATGGATCTGCTTGAGGAAACTGATAGGCAAATGGGGTTAGAGGGGTCGAGGTATACCCTGGGAGATGATTGGGATGATTACGAAGACGAAGATGAAGAAGATGAAGAGGAAGAAGAAGGGGGCGTGGAGTACACTTGCTGCGTGTGTATGGTGAGGCATAAAGGTTCGGCGTTTATACCATGCGGCCACACGTTTTGTAGGTTGTGTTCAAAGGAGCTTTGGGTCAGTAAGGGAAATTGCCCACTTTGCAACAATTTTACTTTGGAAATTCTTGACGTTTTCTGA 1047 0.5167 MPAAETSRKLAGWTLDDVLANQKRGAAPTQSNQPSQQTLLDIIREDNSNKKDRKTWKTFKDKLRLKRAGSAWTSSIHIPASDIPNPRKSNNNSRAQSRISQKKTVRPSNLDMSTHPMDSRQVEDLDPTDPIVRPQFTRRVSSRYEGDSSENKLKPSISRHNSNRMIGRTESTRRERAVTFREPYDSDEGESDDDDEHDSTKPSREVRTLSAREAVAAQEAAEAAAAAAAAAAEEEEAGEGVADIAGAEPVTMSLMDLLEETDRQMGLEGSRYTLGDDWDDYEDEDEEDEEEEEGGVEYTCCVCMVRHKGSAFIPCGHTFCRLCSKELWVSKGNCPLCNNFTLEILDVF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01190 348 MobiDBLite consensus disorder prediction 166 185 - -
Bach6g01190 348 MobiDBLite consensus disorder prediction 67 210 - -
Bach6g01190 348 Pfam Zinc finger, C3HC4 type (RING finger) 297 339 - -
Bach6g01190 348 ProSiteProfiles Zinc finger RING-type profile. 300 338 IPR001841 -
Bach6g01190 348 PANTHER OS01G0917900 PROTEIN 9 348 - -
Bach6g01190 348 SUPERFAMILY RING/U-box 299 343 - -
Bach6g01190 348 SMART ring_2 300 337 IPR001841 -
Bach6g01190 348 MobiDBLite consensus disorder prediction 277 292 - -
Bach6g01190 348 MobiDBLite consensus disorder prediction 74 116 - -
Bach6g01190 348 CDD RING-HC 298 337 - -
Bach6g01190 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 348 IPR013083 -
Bach6g01190 348 MobiDBLite consensus disorder prediction 270 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01190 Bach-Chr6 10317309 10318355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01190 7 348 C3H Transcription Factor Family AT3G07120 37.368 3.04e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01190 - - gmx:100795449 306.219