Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01152 ATGGAGAAGAAAACGGAAAATAAAAACGATGTCGGCTGTGAAGGAGGAGAAGAACAAATATCCGATTCCTTTGTCTGTTGCGTTTGCTTGGATCTAATATACAAACCCATTGTACTATCTTGTGGTCACATATCCTGTTTCTGGTGCGTGCACAAATCAATGAATGGTCTGCATGAGTCTCATTGTCCAATTTGTAGGCATCCATACTATCACTTTCCAACCATCTGTCAGATGCTTCACTTTTTGCTTCTAAAGATGTATCCTGTTGCTTACACAAGAAGGGAACATCAAACTCTAGATGAAGAAAAGATAGTAGGCTTTTACTCACCTCAGTTGGATGCTGACGCATGTGGATCCCACGCTAAATATCTTTATCCAGGCAGTTCATCTTCCTGCTCTATCAAAACCTCGGAGTCCAACTCATGTCCAACTTCTTTATTGAGTAGCAGCATGGAATCTTCTGCACATAAGGAGCAATCAGGGTCTGCTTCACATAAACATGATGAAGATGCTGTCCATCGTGAACATACTTCTGATGGAACAACTGTAGCGATTGGGACTCTGAGTCCTTCTGTTAAAGGAGAAAATTTTCCCCAGAGTGAGCAACATGGTCAGATGAAGATTTCAGTTGCAGATCTGATGTGTACAGCATGCAAGCAATTGCTCTTTAATCCTGTAGTCCTTAACTGTGGTCACGTGTATTGTGAAGCATGCTTCATCAGCTCAGCTGATGAGATGCTTAGATGTCAGGTTTGTCAAAGTCCACATCCAAGAGGATATCCAAAAGTATGTTTGGAGCTTGTTCACTTTTTGGAGAAACAGTTTCCCGAAGAATATGCACAACGAAGAGATGCTATTCAACTTAGACAAATCAATGTCCAACCTGAGCCTCCTTCTTCCTGTTTACTGGATAAGGCTACCAATGGAGAAAATGTTGCATGGTGGTCTGATCCTAACTCAAAAGTTCACGTAGGAGTTGGTTGTGACTTTTGCGGGATGTATCCAGTAATTGGGGACAGATACAGATGCAAAGACTGTAAGGAGAAAATTGGTTTTGATCTCTGCAGCGATTGCTATAACTCCCAGTCGAAGCTTCCGGGCCGGTTCAATCAGCAGCATACCTCAGAACACAAGTTTGAGCTTGTACAAACCAATATCATTCATAATATAATGTTGAGGCTGGGTAGTGGACAGTTATTGGAAGCTACAGCTGACCATGAGTCTCTGGATAATTTAGAATTGATATATGAAGAACCCTCTTTGTTTGGTGATGTAGAAGATAATCAGCATGGCTCAGGAGACCCACATCAAGATTTTTAACTCACCGAATCTGATAATCTACAGCTTTTCTGGGGAACTTGGTGGATATAATTCCTTGCCAACCCAACTGGATGCAATGGTTCAAGACAGTTTGCAGTCTGGTTGACTGTGGAACTGAGCAAGACCTTGAAGTTGGAGGTGAAAAATCTTCCATGTGGCTATATTTGGTGATATTCAGTGCGTGGTACCCTAAATATGTAAATGATAACTTTTCTCTTCCAAATCTACTTCTCCCTCTGAGGACACACTTTTGTTACTACATAGGTTTAAATGGCTGGATTTAAGATTATGATCTTGTACATCCTAAAGTCTAGGCTTTTATGCAACCTTGAATATATTGATTTGGATATTGTAAATAGGAAGTAACATTTAAAGAATAAAGTGTAAAAATAAAA 1715 0.4035 MEKKTENKNDVGCEGGEEQISDSFVCCVCLDLIYKPIVLSCGHISCFWCVHKSMNGLHESHCPICRHPYYHFPTICQMLHFLLLKMYPVAYTRREHQTLDEEKIVGFYSPQLDADACGSHAKYLYPGSSSSCSIKTSESNSCPTSLLSSSMESSAHKEQSGSASHKHDEDAVHREHTSDGTTVAIGTLSPSVKGENFPQSEQHGQMKISVADLMCTACKQLLFNPVVLNCGHVYCEACFISSADEMLRCQVCQSPHPRGYPKVCLELVHFLEKQFPEEYAQRRDAIQLRQINVQPEPPSSCLLDKATNGENVAWWSDPNSKVHVGVGCDFCGMYPVIGDRYRCKDCKEKIGFDLCSDCYNSQSKLPGRFNQQHTSEHKFELVQTNIIHNIMLRLGSGQLLEATADHESLDNLELIYEEPSLFGDVEDNQHGSGDPHQDF 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01152 439 SMART zz_5 322 368 IPR000433 GO:0008270
Bach6g01152 439 MobiDBLite consensus disorder prediction 180 200 - -
Bach6g01152 439 ProSiteProfiles Zinc finger ZZ-type profile. 323 387 IPR000433 GO:0008270
Bach6g01152 439 Pfam Zinc finger, ZZ type 323 363 IPR000433 GO:0008270
Bach6g01152 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 90 IPR013083 -
Bach6g01152 439 PANTHER UNCHARACTERIZED 17 400 - -
Bach6g01152 439 FunFam E3 ubiquitin-protein ligase PRT1 317 382 - -
Bach6g01152 439 ProSiteProfiles Zinc finger RING-type profile. 215 253 IPR001841 -
Bach6g01152 439 FunFam E3 ubiquitin-protein ligase PRT1 202 298 - -
Bach6g01152 439 SMART ring_2 26 65 IPR001841 -
Bach6g01152 439 SMART ring_2 215 252 IPR001841 -
Bach6g01152 439 Pfam Zinc finger, C3HC4 type (RING finger) 25 69 - -
Bach6g01152 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 202 296 IPR013083 -
Bach6g01152 439 FunFam E3 ubiquitin-protein ligase PRT1 17 112 - -
Bach6g01152 439 SUPERFAMILY RING/U-box 314 383 - -
Bach6g01152 439 MobiDBLite consensus disorder prediction 159 177 - -
Bach6g01152 439 SUPERFAMILY RING/U-box 19 76 - -
Bach6g01152 439 ProSiteProfiles Zinc finger RING-type profile. 26 66 IPR001841 -
Bach6g01152 439 SUPERFAMILY RING/U-box 211 275 - -
Bach6g01152 439 Gene3D - 316 382 IPR043145 -
Bach6g01152 439 MobiDBLite consensus disorder prediction 153 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01152 Bach-Chr6 9788455 9795842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01152 17 66 C3H Transcription Factor Family AT1G74990 41.176 3.75e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01152 - - qsa:O6P43_026613 544.273