Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01137 ATGCCAGCATTGATCTCAACACGGTTGCTTCTGCTCGTTGGAGAGTCATTGCCAATTAGAAGGTTTTTACCCACTTCTAGAAGAGTTAGGTTGAACAGCAGTGTTCGTTTTCTGAGTCAGGTAGCTCCTGACCATGCTTCTCTCACTCTTTCGAGCCTTGGTTTCAATGGTGAAACTGAAACTGGTTATAAAACAAAATCAAATAAACTAAAGCAATTGAATTCCTCCTCTGAAGCCTTCAAGAGAAAAGCAAAAATAAATGAAGTTAGGGAAGTTGGAGCCAAAAGGACACAGAAAATAGAATTGGCTCCATTTGCTGCAAAATCATTTTCTGAACTTGGCCTCCCGCATTTGTTAATTGAGAGGTTAGAAAATGAGGGTTTCACAGTTCCAACAGAAGTCCAGTCTGCAGCAATTCCTACCATTTTGAAACATAATGATGCTGTAATTCAATCTTACACAGGATCAGGGAAAACATTGGCTTATCTCCTTCCTATACTCTCTGATGTTGGTCCACTAAGGAACAAACCTTCTGAAGGTGATATTGATGGTGAATCTGGGAGGAAATTGGGAATAGAGGCAGTAGTCGTTGCTCCCTCGAGGGAGCTGGGCATGCAAATAGTGAGGGAGTTTGAGAAGGTACTAGGACCTGCTAACAAAAAAGTGGTTCAGCAGCTTGTGGGGGGTGCAAACCGATCTAGGCAGGAAGAAGCTCTCAAGAAAAATAAACCTGCTGTTGTTATTGGTACGCCTGGTAGAATAGCGGAGCTCAGTGCAGCTGGGAAGCTTCACACCCATGGTTGTCGTTTTCTGGTCCTAGATGAAGTTGATGAACTCCTATCATTTAACTTTAGGGAAGACATGCACAGGATACTGGAACATGTTGGGAGGAAATCAGGTGCAGCTATGCGCGGTCCAAAAAGCCCAATTACAAGACGATCTGAGAGGCAGATGATTATGGTATCTGCAACTGTGCCATTTTCTGTTGTAAGGGCAGCCCGGAACTGGGGATGTGATCCACTTCTTGTCCAAGCCAAGAAAGTTGTCCCGCTTGAAACCATCTCTCCTTCCCAACCTGTTAACTTGTCAAATCCGAACCCAAATATGGTAGTGCAGGCAGCATTAGAAAGTCTACCTCCTGCCTTGAAACATTATTATAGTGTCACGAAGTTACAACACAAGGTTGATACTTTGAGAAGGTGTGTTCATGCATTAGATGCCAAATTTGTTATAGCTTTCATGAACCATACTAAGCAGCTGAAGGATGTTGTCTTCAAGCTAGAGGCCCGTGGGATGATAGCTGCAGAGTTACATGGGGATCTTGGGAAGCTTGCTAGGTCAACAACTCTGAAAAAGTTCAAGAATGGTGAGGTGAGAGTTTTGGTGACAAATGAATTATCAGCAAGGGGTTTAGATGTGGCAGAATGTGATCTTGTCGTTAATCTGGACTTACCCACAGACTCAATTCACTATGCACACAGAGCTGGTCGCACTGGTCGGCTTGGAAGGAATGGTACTGTGGTTACTATATGTGAAGAGCCAGAAGTGTTTGTTGTGAAGAAATTGCAGAAGCAGCTTGGCATATCAATACCAAGCTGTGAGTTTACGGAGGGGAAGCTGCTTGTCACTGAAGAAGAAAAACTAACCACTGTTAGAAGTTAA 1662 0.4356 MPALISTRLLLLVGESLPIRRFLPTSRRVRLNSSVRFLSQVAPDHASLTLSSLGFNGETETGYKTKSNKLKQLNSSSEAFKRKAKINEVREVGAKRTQKIELAPFAAKSFSELGLPHLLIERLENEGFTVPTEVQSAAIPTILKHNDAVIQSYTGSGKTLAYLLPILSDVGPLRNKPSEGDIDGESGRKLGIEAVVVAPSRELGMQIVREFEKVLGPANKKVVQQLVGGANRSRQEEALKKNKPAVVIGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFREDMHRILEHVGRKSGAAMRGPKSPITRRSERQMIMVSATVPFSVVRAARNWGCDPLLVQAKKVVPLETISPSQPVNLSNPNPNMVVQAALESLPPALKHYYSVTKLQHKVDTLRRCVHALDAKFVIAFMNHTKQLKDVVFKLEARGMIAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVVTICEEPEVFVVKKLQKQLGISIPSCEFTEGKLLVTEEEKLTTVRS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01137 553 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 139 343 IPR014001 -
Bach6g01137 553 Gene3D - 66 345 IPR027417 -
Bach6g01137 553 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 34 542 - -
Bach6g01137 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 522 IPR027417 -
Bach6g01137 553 Gene3D - 379 542 IPR027417 -
Bach6g01137 553 Pfam Helicase conserved C-terminal domain 403 502 IPR001650 -
Bach6g01137 553 Pfam DEAD/DEAH box helicase 132 329 IPR011545 GO:0003676|GO:0005524
Bach6g01137 553 CDD DEADc 119 344 - -
Bach6g01137 553 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 108 136 IPR014014 GO:0003724
Bach6g01137 553 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 397 541 IPR001650 -
Bach6g01137 553 SMART ultradead3 127 354 IPR014001 -
Bach6g01137 553 SMART helicmild6 421 502 IPR001650 -
Bach6g01137 553 CDD SF2_C_DEAD 382 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01137 Bach-Chr6 9643715 9645376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01137 109 530 Eukaryotic Initiation Factors Gene Family AT3G19760 23.934 2.27e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01137 - - cave:132173385 809.29