Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01118 ATGCCGAGGCAATCTTTCATCATCCTCAGCCTTCACAACCACTTTGTTGTGCGTTTTCTCCTCTTCATCCTGGCTGTTAATTTTGCTTCTACTGCTGCTAATAATGAAGCTCATGTTCTGCTTTCATGGGTTCATAGCTCCTCCTCTAAAGTTCCTTTTACCTTTTCTGATTGGAACCCTTTGGATTCTAGCCCTTGTAACTGGTCTTACATCAAATGCTCTGCAGAGAACTTTGTGACTGAGATTGAAATCCGAGGAACTGAGCTAGATCTTCCCTTTCCTTCCAACATTTCTTCCCTTCCTTTCCTTCAAAGGCTTGTCATTTCTGAAGCTAACCTCACTGGGTTTATCTCACCAGATATTGGAAACTGCCCTAGGCTTATAGTCATTGACCTTAGCTCAAATAGTCTTGTGGGTAACATTCCTTCAAGTATTGGGAAGCTCCAAAACCTCCAAGACTTGACTTTGAACTCTAACCAGCTCACTGGAGAAATCCCACCTGAGATTGGTGCTTGTGTTAGCCTTAAGAACCTCAACATATTCGACAATAATCTTAGTGGGGTTCTTCCAGTTGAGTTGAGAAAACTCTCAAATCTGGAGATTATACGTGCAGGAGGGAACAAGGATATCGAGGGGAAGATTCCAGATGGGCTTGGAGATTGCAGGAATTTGACAACAGTTGGTCTTGCTGATACTAAAATTTCTGGTTCAATTCCTGCTTCATTGGGTAAACTAAGCAAGCTTCAGACTATCTCTGTTTATAGTACTATGGTCTCTGGTGAGATTCCACCTGAAATCGGCAACTGTTCAGAGCTTGTGAACTTGTTTTTATATCAGAATGATCTCTCAGGTTCACTGCCAAGAGAGCTAGGCAGGCTTCAGAAGCTAGTGAAGATGTTACTGTGGCAGAACAACTTCGTTGGGGGCATTCCTGACGAAATTGGAAACTGCAGGAACTTGAAGATTCTTGATATCTCCTTAAATTCTTTCTCTGGAAGCATTCCCAAGACTTTTGGGAACCTCTCAAACCTTGAAGAGCTTATGCTGAGCAACAATAACATCTCTGGTTCAATACCACCAGATATTTCCAAACTTCAAAATCTAATACAACTGCAGTTGGATACTAATGAGCTATCGGGTCCAATTCCAGCTGAACTTGGAGGGTTGACAAAGGTAACAGTCTTTTTTGCTTGGCAGAATATGCTTGAAGGAAGCATTCCATCAGCATTGGGTGGTTGTGTAAGCCTTGAAGCTCTAGATTTGTCATACAATGCTCTCACTGGTAGCTTACCCCCAAGCCTATTTGAGCTTCAAAATTTAACAAAGTTTCTAGTAATTTCTAATGAAATTTCTGGTCCCATCCCCCCTGAGATTGGTAAATGCAGCTCTCTCATTCGACTCAGGCTAGTAAACAACAAAATAAGTGGGACAATACCTAGAGAAATTGGCTTCCTTAATAGCCTCAGCTTCCTTGATCTATCTGAAAATCATCTCACTGGGCCAATGCCAGATACTATTGGGAATTGCAAAGAACTGCAAATGATGAATCTGAGCAATAATTCCCTTTCTGGTGCATTGCCTAGTTCTTTATCTTCTCTCACGAGGCTTGAGGTCTTGGATGTTTCTCTGAATCACTTTTCTGGTGAGCTTCCCGTGAATATAGGCCAACTCACTTCACTTCTTAGACTCATTCTTAGCAAAAATTCATTCTCTGGATCAATACCATCCTCGTTAGGACACTGTTCAGGTCTTCAACTGCTAGATCTTAGCAGCAACAATTTCTCAGGGAGCATCCCAGCTGACGTCTTTGAAATTGAAGCACTTGGCATTGCTCTTAATTTGAGTCACAATGCTTTATCTGGTGTAATCCCACCTCAGGTTTCTGGTTTGGACAAGCTGTCCATACTAGACCTTTCACACAATCAGCTTGAAGGTGATCTAATGGCATTTTCAGGGCTTGAAAATCTTGTTTCTTTGAACATCTCTTACAACAAATTCACTGGTTTTCTCCCGGACAGCAAGTTATTCCATCAATTATCAGCAACAGATTTGGAAGGAAATCAAGGATTATGTCCTAATGGTCACAATTCATGCTTCATTAGCAATGATGCGATTGGAAAAATGCAAAGTAGTAGTGACTCTAAGAGATCAGAGAGGATCAAACTGGCCATTGGATTGCTTAGTGCCTTGACTGTTGTATTGGCAATTTTCGGAGTCTTTACAGTCTTTCGAGTAAGGAAAATGGTTCGAGATGACAATGATTCTCAGGTGGGAGGGGATTCGTGGCCTTGGCAGTTCACCCCATTCCAGAAGCTAAGTTTCTCAGTGGAGCAAGTTTTGAAATGTCTAGTGGAATCCAATGTAATTGGAAAGGGATGTTCTGGGATTGTTTATCGTGCTGAAATGGAAAATGGAGATGTCATTGCTGTGAAGAAGCTATGGCCAACAACAATGGCTTCCAAATATGATTGTCAAAGTGACAAGTTAGCAGTTAATGGAGGAGTTCGTGATTCGTTTTCAGCTGAGATAACAACTCTTGGTTCAATCCGCCACAAGAACATTGTCAGGTTCTTGGGTTGCTGTTGGAACAGAAACACAAGATTGCTCATGTATGATTATATGCCAAATGGGAGTTTAGGAAGTCTACTTCATGAAAGAAGTGGCAACTGCTTGGAATGGGACATCAGATACAAGATTGTACTTGGAGCTGCTCAAGGATTGGCTTATTTACACCATGATTGCGTTCCTCCAATTGTTCACAGGGACATTAAAGCCAACAACATTCTCATAGGTCCTGAATTTGAACCTTACATAGCAGATTTTGGGCTCGCCAAACTTGTTGACAATGGAGATTTTGCACGATCTTCTAGCACATTAGCAGGCTCCTATGGTTACATTGCTCCTGAGTATGGTTATATGATAAAGATAACAGAGAAAAGTGATGTGTATAGCTATGGCATTGTGGTATTAGAAGTCTTGACAGGGAAGGAACCAATTGATCCAACAATACCAGATGGAGTTCATGTTGTTGACTGGGTAAGACAGAAAAGAGGTGGAGTTGAAGTCCTTGATCCAAGCTTGCGTGCTCGGCCGGAATCTGAGATTGAGGAAATACTGCAAACACTAGGTGTGGCTCTACTCTGTGTAAACCCTTGCCCAGATGATAGACCAACCATGAAAGATGTAGCAGCAATGCTCAAAGAAATTAGGCAGGACAAAGAGGAGTACAAGAAAGTTGACATGCTTCTTGATGGATCTTCTGCAGCAAATGATCAAACAGATTGCATTCTTTCCAATGGGGAGCCAACAACAAAGATGAAAGACAAACACTCACACCCAATAAGCAGCAGCAACACATATTTTTCAGCATCTTTATGGCTTTCCCCTTCTTCCTCCAATACTAAAGCAAGTTTCACGTAG 3420 0.4173 MPRQSFIILSLHNHFVVRFLLFILAVNFASTAANNEAHVLLSWVHSSSSKVPFTFSDWNPLDSSPCNWSYIKCSAENFVTEIEIRGTELDLPFPSNISSLPFLQRLVISEANLTGFISPDIGNCPRLIVIDLSSNSLVGNIPSSIGKLQNLQDLTLNSNQLTGEIPPEIGACVSLKNLNIFDNNLSGVLPVELRKLSNLEIIRAGGNKDIEGKIPDGLGDCRNLTTVGLADTKISGSIPASLGKLSKLQTISVYSTMVSGEIPPEIGNCSELVNLFLYQNDLSGSLPRELGRLQKLVKMLLWQNNFVGGIPDEIGNCRNLKILDISLNSFSGSIPKTFGNLSNLEELMLSNNNISGSIPPDISKLQNLIQLQLDTNELSGPIPAELGGLTKVTVFFAWQNMLEGSIPSALGGCVSLEALDLSYNALTGSLPPSLFELQNLTKFLVISNEISGPIPPEIGKCSSLIRLRLVNNKISGTIPREIGFLNSLSFLDLSENHLTGPMPDTIGNCKELQMMNLSNNSLSGALPSSLSSLTRLEVLDVSLNHFSGELPVNIGQLTSLLRLILSKNSFSGSIPSSLGHCSGLQLLDLSSNNFSGSIPADVFEIEALGIALNLSHNALSGVIPPQVSGLDKLSILDLSHNQLEGDLMAFSGLENLVSLNISYNKFTGFLPDSKLFHQLSATDLEGNQGLCPNGHNSCFISNDAIGKMQSSSDSKRSERIKLAIGLLSALTVVLAIFGVFTVFRVRKMVRDDNDSQVGGDSWPWQFTPFQKLSFSVEQVLKCLVESNVIGKGCSGIVYRAEMENGDVIAVKKLWPTTMASKYDCQSDKLAVNGGVRDSFSAEITTLGSIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERSGNCLEWDIRYKIVLGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVDNGDFARSSSTLAGSYGYIAPEYGYMIKITEKSDVYSYGIVVLEVLTGKEPIDPTIPDGVHVVDWVRQKRGGVEVLDPSLRARPESEIEEILQTLGVALLCVNPCPDDRPTMKDVAAMLKEIRQDKEEYKKVDMLLDGSSAANDQTDCILSNGEPTTKMKDKHSHPISSSNTYFSASLWLSPSSSNTKASFT 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01118 1139 SMART serkin_6 783 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01118 1139 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Bach6g01118 1139 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 33 190 - -
Bach6g01118 1139 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 415 702 - -
Bach6g01118 1139 Gene3D Ribonuclease Inhibitor 198 305 IPR032675 -
Bach6g01118 1139 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 289 397 - -
Bach6g01118 1139 Gene3D Ribonuclease Inhibitor 398 702 IPR032675 -
Bach6g01118 1139 SUPERFAMILY Protein kinase-like (PK-like) 766 1066 IPR011009 -
Bach6g01118 1139 SUPERFAMILY RNI-like 358 688 - -
Bach6g01118 1139 Gene3D Ribonuclease Inhibitor 32 197 IPR032675 -
Bach6g01118 1139 Gene3D Ribonuclease Inhibitor 306 397 IPR032675 -
Bach6g01118 1139 FunFam Predicted protein 191 288 - -
Bach6g01118 1139 Pfam Leucine rich repeat 318 378 IPR001611 GO:0005515
Bach6g01118 1139 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 766 873 - -
Bach6g01118 1139 PANTHER RECEPTOR-LIKE PROTEIN 55 442 1071 - -
Bach6g01118 1139 Gene3D Phosphorylase Kinase; domain 1 767 873 - -
Bach6g01118 1139 Pfam Protein kinase domain 785 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01118 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 918 930 IPR008271 GO:0004672|GO:0006468
Bach6g01118 1139 SMART LRR_typ_2 341 365 IPR003591 -
Bach6g01118 1139 SMART LRR_typ_2 148 172 IPR003591 -
Bach6g01118 1139 SMART LRR_typ_2 413 437 IPR003591 -
Bach6g01118 1139 SMART LRR_typ_2 533 557 IPR003591 -
Bach6g01118 1139 SMART LRR_typ_2 630 652 IPR003591 -
Bach6g01118 1139 SMART LRR_typ_2 653 678 IPR003591 -
Bach6g01118 1139 SMART LRR_typ_2 485 509 IPR003591 -
Bach6g01118 1139 SMART LRR_typ_2 581 605 IPR003591 -
Bach6g01118 1139 ProSiteProfiles Leucine-rich repeat profile. 343 365 IPR001611 GO:0005515
Bach6g01118 1139 Coils Coil 1059 1079 - -
Bach6g01118 1139 SUPERFAMILY L domain-like 35 307 - -
Bach6g01118 1139 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 874 1084 - -
Bach6g01118 1139 Gene3D Transferase(Phosphotransferase) domain 1 874 1090 - -
Bach6g01118 1139 PRINTS Leucine-rich repeat signature 416 429 - -
Bach6g01118 1139 PRINTS Leucine-rich repeat signature 630 643 - -
Bach6g01118 1139 ProSiteProfiles Protein kinase domain profile. 783 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01118 1139 ProSitePatterns Protein kinases ATP-binding region signature. 789 812 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01118 Bach-Chr6 9458605 9462245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01118 34 1085 Receptor kinase-like Gene Family AT5G56040 46.910 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach6g01118 Pkinase 7.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01118 - - gmx:100815339 1732.23