Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01112 TTCCGCTTCACCTCCACGCTCTGCGTGTTCTCACGCGCCTCCATGGAGAACGACAAGGCTTTGCGCCTCCAGAACCTCATCCAGCTCGTCAACCAAATCTCTAAGATTTCCGACTTCAAGTGTGTCGTCAAGAAGCAATGCTGCGATCTCAGTAGGAGGATTAGGATAATCTCGCTTCTCTTTGAGGAATTCAGTGAAATTAAGGATGACATTTCGGAGGAGACTGTCAATGCTCTGGTTTCGTTGAAGGGCGCTCTCGAGAAGGCTAAGGAATTGCTCCAACATGGTAGCCATGGAAGCCAGCTTTATATGATACTGGAGAGCGAGCAAATTAAGTATAAATTCAATGATCTCTCGGCTCAATTTGAACAAGCTCTAAGCAATATCACCTATGACAAACTTGATATTTCTGAAGAAGTCAAGGAGCAGGTTGCACTAGCACATGCTCAGTTTGGAAGGGCCAAGGAGCGTATGGAACCACCTGGTGGGGAGCTTCACGAGTACTTGTCCAATTATAACGGCAGCTCTGATAAGATCTCGGACCCTGCTATGCTACGTATCATTTGTGAAAAGTTACAATTTATCGATGTGGAAGACATCAAACATGAGGAACTTGCACTGCATAAGATGATTGTAACTAAAGGTGGTGATCTAGAGAAAAGCACCCAGGAGATGTTTACACTGTTAAAAAAAATTGAAGATTTTTTGCTGATGGAATCTACAAATGTCGCTGTGTCTGTAAGTGAGGACTGTCCTCATGCTGATGACCCCTACTGCAAACTGAGTTCTCAATCACTGGTCATGCCAGATGAGTTTCGCTGCCCAATATCACTGGAGTTGATGAAAGATCCTGTTATCACTTCCACTGGGCAGACATATGAACGAGGCTGCATAAAGAAATGGCTAGAAGCCGGGCATAGAACATGTCCCAAGACACTGCAGATTCTTTCCAGCACTATCCTCATTCCCAACCATGCTTTATATAGTCTGATTTCCAATTGGTGTGAGTCAAATGGGGTGGAACCACCAAAAAGATTAGGGAACTTACGCCTCTGTATGGTAACATCTGATGGTTCTTCTGAATTTATAGAGCTCGATGTCCTGCTGAGCAAACTTACTTCCCAAGACATTGAGGATCAGCGATATGCTGCAGGTAAGCTCCGTCATCTTGCCAAGAACAATGGTCAAAATCGCCTGCTGATTGCTGAGGCTGGTGCTATACCCCTCCTTGTTAAACTTCTCTATGCACCTGACTTGCGTACCCAAGAGCATGCAGTTACTGCTCTTTTGAACTTGTCTATTTGTGAGGATAATAAAGAGTGCATCATGGCCTCTGAGGCTATTCCTGGGATCCTTCATGTGCTCAAAAATGGTAGTATGGAAGCTCGGGAAAATGCAGCAGCCACCTTTTTCAGCCTCTCTGTTGTGGATGATTACAAAGTGGCAATTGGTGCATCCGGAGCAATCCCAGCGCTAGTTACACTTTTATGTGAGGGTAGTCAAAGAGGGAAGGCGGATGCTGCAAATGCTCTATTCAATCTGTGTCTATATCAAGGGAACAAGGGACGGGCTGTCAGGGCTGGCGTCGTGCCCAAGTTGATGGAACTACTAACAGAACCTGGTCGGGAGATGATGGATGAATCATTGGCAATTATGGCAGTACTAGCTAGCTACCCTGATGGAAAAGCAGCAATTGGATCTTTGAATGCTGTGCCCACTTTGGTAGATTTAGTTGGTAATGGATCTCCTCGGAACCAAGAGAATGCAACCGCCGTGCTGGTGCACCTCTGTGGTGTTGATCCCCAACATCTGTCACTTGCCATATCACTTGGGGTGATTAATCCTCTTCTGGACCTGGCAGAAAGTGGCACAGAGAGGGGAAAGCGAAAAGCTACTCAGCTGCTCGAACTTATAGGCAAATCTGCATAGCATTGTGAACATACATGTCAAACTGTCCCCTAGCTTCATTCTTCAGGTGATGCTGTTGCCCCTGCAAGTTGCAGCGGGAAACTCAGGTATTGATTGAGGACGTGTTTTACAGTAGTTTAATTAGTCCAGTATTGTTAATATTAGATTTCATTTTTGAGTTAAAAAGCAATTTCACTTTCTACTCTACAGTTATTTAGTATTTTAGTTTCATCACCCATGTTGGAAAGCTGCTGAGCATTGTTGTATAGAAAGATGCTTACGATATGGTTAAAGAAAAGGATCAGTTTTGTATTCTCTTCACTCCAACTCCTAGTGACATTTATTCTTTGAGTAAATGAATTTTCCACAGGAATTGTGG 2287 0.4429 MENDKALRLQNLIQLVNQISKISDFKCVVKKQCCDLSRRIRIISLLFEEFSEIKDDISEETVNALVSLKGALEKAKELLQHGSHGSQLYMILESEQIKYKFNDLSAQFEQALSNITYDKLDISEEVKEQVALAHAQFGRAKERMEPPGGELHEYLSNYNGSSDKISDPAMLRIICEKLQFIDVEDIKHEELALHKMIVTKGGDLEKSTQEMFTLLKKIEDFLLMESTNVAVSVSEDCPHADDPYCKLSSQSLVMPDEFRCPISLELMKDPVITSTGQTYERGCIKKWLEAGHRTCPKTLQILSSTILIPNHALYSLISNWCESNGVEPPKRLGNLRLCMVTSDGSSEFIELDVLLSKLTSQDIEDQRYAAGKLRHLAKNNGQNRLLIAEAGAIPLLVKLLYAPDLRTQEHAVTALLNLSICEDNKECIMASEAIPGILHVLKNGSMEARENAAATFFSLSVVDDYKVAIGASGAIPALVTLLCEGSQRGKADAANALFNLCLYQGNKGRAVRAGVVPKLMELLTEPGREMMDESLAIMAVLASYPDGKAAIGSLNAVPTLVDLVGNGSPRNQENATAVLVHLCGVDPQHLSLAISLGVINPLLDLAESGTERGKRKATQLLELIGKSA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01112 628 CDD RING-Ubox_PUB 255 307 IPR045210 -
Bach6g01112 628 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 391 433 IPR000225 GO:0005515
Bach6g01112 628 FunFam RING-type E3 ubiquitin transferase 6 118 - -
Bach6g01112 628 Gene3D - 491 628 IPR011989 -
Bach6g01112 628 SUPERFAMILY RING/U-box 253 330 - -
Bach6g01112 628 FunFam RING-type E3 ubiquitin transferase 253 327 - -
Bach6g01112 628 PANTHER U BOX DOMAIN-CONTAINING 30 623 - -
Bach6g01112 628 SUPERFAMILY ARM repeat 351 624 IPR016024 -
Bach6g01112 628 FunFam RING-type E3 ubiquitin transferase 339 628 - -
Bach6g01112 628 SMART arm_5 586 626 IPR000225 GO:0005515
Bach6g01112 628 SMART arm_5 462 502 IPR000225 GO:0005515
Bach6g01112 628 SMART arm_5 379 420 IPR000225 GO:0005515
Bach6g01112 628 SMART arm_5 503 543 IPR000225 GO:0005515
Bach6g01112 628 SMART arm_5 544 584 IPR000225 GO:0005515
Bach6g01112 628 SMART arm_5 421 461 IPR000225 GO:0005515
Bach6g01112 628 Gene3D - 7 118 IPR036537 GO:0007166
Bach6g01112 628 Pfam U-box domain 255 324 IPR003613 GO:0004842|GO:0016567
Bach6g01112 628 ProSiteProfiles U-box domain profile. 253 327 IPR003613 GO:0004842|GO:0016567
Bach6g01112 628 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 327 IPR013083 -
Bach6g01112 628 SMART Ubox_2 257 320 IPR003613 GO:0004842|GO:0016567
Bach6g01112 628 Pfam Armadillo/beta-catenin-like repeat 545 583 IPR000225 GO:0005515
Bach6g01112 628 Pfam Armadillo/beta-catenin-like repeat 382 419 IPR000225 GO:0005515
Bach6g01112 628 Pfam Armadillo/beta-catenin-like repeat 464 501 IPR000225 GO:0005515
Bach6g01112 628 Gene3D - 336 490 IPR011989 -
Bach6g01112 628 CDD MLKL_NTD 30 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01112 Bach-Chr6 9262430 9267119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01112 1 628 U-box Gene Family AT3G46510 54.200 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01112 - - qsa:O6P43_026551 845.884