Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01059 ATGGCTTCGATGGGATCTTCGTACTGGTGCTACAGATGCGATCAATTCGTTAGGGTTCAAATTGGTGCCGAGGATGATCTACTCTGCCCTGATTGTGGAGCTGGTTTCGTAGAAGAAATCAGAACCCCTAGTCACTCTCCTTTCCATCGATTTCCTGCAGCCGCAATGTATGTCGATGATGGGTCTAACTCGGAGCATGGTTCCAACCTAAGATTGCGTCGGAGCCGAAGGAATGGTGGGGATCGGTCTCCGTTTAACCCGGTTATTGTTCTACGTGGACCCGCTGATGGTGGTGGTGGCGGTGGAAATGACGGTGTTGGTGCTGAAAGAGGGAACTTTGAGCTTTTTTACAACGAAGGTACTGGTTCGGGTCTTCGGCCTTTACCTGCAAGCGTCACGGAATTCCTGATGGGTTCTGGATTTGACCATCTTCTTGAGCAGTTGGCTCAGTTAGAAGTGACTGGAGTTGGGCGATTGGACCAGCCTCCGGCATCGAAAGCTGCAATTGAATCCATGCCCACAATCAAGATTGTTGCTGAACATGTTTCAGCGGATTCGCATTGTGCTGTTTGTAAGGAACCTTTTGAGCTCAATACGGAAGCTCGTGAAATGCCCTGTAAGCACATTTACCATTCTGATTGTATCCTTCCATGGCTTTCAATTCGTAATTCCTGTCCAGTTTGTCGCCATGAGCTACCTACTGACCTCCGTGGGAGTGGCAGTGGCAGAAACTCCCCTGTGTCCGACGGTGAAAGGGATGATGATGCTGTGGGGTTAACCATATGGAGACTTCCTGGTGGTGGGTTTGCTGTAGGGAGGTTCACTGGGGGCAGAAGAGCTGCGGAACGTGAACTTCCTGTTGTGTACACAGAAATGGACGGTGGATTCAATAACGTTGGTGTTCCAAGAAGGGTTTCTTGGGAATCAAGTGTGAGAAGATCAAGGGAGACTAGGGGAATGGGTAGTGTAGTTCGCAACTTCTTCTCATATTTTGGAAGATTTAGGAGTTCCTTCTCTCGTTCCTCCAGTGCTAATCCTGGGATGAGTGGAAGAACTCGTTCCACTAGAGTATTCACTAGATTTTCAAGGAGAAGCAGCTAG 1101 0.4896 MASMGSSYWCYRCDQFVRVQIGAEDDLLCPDCGAGFVEEIRTPSHSPFHRFPAAAMYVDDGSNSEHGSNLRLRRSRRNGGDRSPFNPVIVLRGPADGGGGGGNDGVGAERGNFELFYNEGTGSGLRPLPASVTEFLMGSGFDHLLEQLAQLEVTGVGRLDQPPASKAAIESMPTIKIVAEHVSADSHCAVCKEPFELNTEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPTDLRGSGSGRNSPVSDGERDDDAVGLTIWRLPGGGFAVGRFTGGRRAAERELPVVYTEMDGGFNNVGVPRRVSWESSVRRSRETRGMGSVVRNFFSYFGRFRSSFSRSSSANPGMSGRTRSTRVFTRFSRRSS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01059 366 ProSiteProfiles Zinc finger RING-type profile. 188 229 IPR001841 -
Bach6g01059 366 Pfam zinc-ribbon 7 40 IPR039525 GO:0061630
Bach6g01059 366 MobiDBLite consensus disorder prediction 66 80 - -
Bach6g01059 366 Pfam Protein of unknown function (DUF1117) 257 356 IPR010543 -
Bach6g01059 366 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 65 233 - -
Bach6g01059 366 Pfam Ring finger domain 187 229 IPR001841 -
Bach6g01059 366 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Bach6g01059 366 FunFam E3 ubiquitin-protein ligase RING1-like 150 235 - -
Bach6g01059 366 SMART ring_2 188 228 IPR001841 -
Bach6g01059 366 MobiDBLite consensus disorder prediction 62 105 - -
Bach6g01059 366 MobiDBLite consensus disorder prediction 339 361 - -
Bach6g01059 366 MobiDBLite consensus disorder prediction 339 366 - -
Bach6g01059 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 235 IPR013083 -
Bach6g01059 366 CDD RING-H2_RNF126-like 188 229 - -
Bach6g01059 366 SUPERFAMILY RING/U-box 168 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01059 Bach-Chr6 8740875 8741975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01059 127 243 C3H Transcription Factor Family AT5G01980 47.009 1.87e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01059 K11982 - qsa:O6P43_016745 522.316