Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01041 ATGGCTGTAGCTTTACTATCTCACTCCTCATCTGTTAATGCCCTCAAGCGTTGCCCAAGTTGTGGCCACAAGCCAGTGCCATATCCACTGAGCACAGGTCCAGATTGTGGGGATCAATCCTACAAGGTTCACTGCAATGCAGGCACCCTCTGGTTCAATGCACTCAATCACTCCTCCTATCAGATCATCTCCATCAACCCCACCACGCAGCGTTTCACTATTCACCCACCTGGTTTTGCTAAGAGCACATGCATGTCAGCTGATTTTCAAAGCAATGGATTAATGCTTGACCCTAACTTGCCGTTCAATATCACTTCCAACAATCAGGTGGTATACATGAACTGCACTGCGGAGGTTTCTGATTCTTGGAATTGCACCGCCTCAAGCATTTGCCATGACTATATTAGGGACAATGCTGCTGCTGCCAAGGCCTGTGGGCCATCTAGCCACGCCTCCAAGATATGTTGCTCGATAAAGACCGGTGGGTCTTCAACTGCATATCATATTAAGGTTAGGAAGGAGCGGTGTTCAGCTTATGAAAGTTTTGTGAATTTGGACATCTTGTTGCCGGTGGAAAAGTGGCCGGAGCCGGCGATGGAGCTACAATGGCAGTTGCCAATGGAGCCTGTGTGTAAGGTAGCCAACGATTGTGCGGATCTGCCGAATTCGGCGTGTTTGCTGGACCCTAGCAGTGTTAGGAGGTGCTTATGCAAGACTGGATTTCAGTGGGATCCTATAAACGCAACATGTCAAAGTATAGCGTTTTCTGGGGCTGCCATGCTCACCGGAACCTTGCTTACGGCGTTGGCATCTTATCATCGGTGGCAGCGCAAGAAGAGAGCAGCAGTGCTGAGCATGAGCAGAGCCCGTGAACTGATTGCAGACAACAGCGGCAAATCAGCCAAGATCTTCATGGGCAAAGAGGTCACAAAAGCAACCAACAATTTCTCCAAAGACAACCTCCTCGGCGCCGGCGGCTTCGGTGAAGTCTTCAGAGGCATTCTTGACGACGGAACCGTCACAGCCATCAAGCGAGCCAAGCTAGGTTGCACCAGAGGCATTGATCAAATACTCAACGAGGTCCGAATCCTCTGTCAAGTCAACCACAGGAGCCTCGTAAGACTCCTAGGTTGTTGTGTCGAGCTTCATGAACCTCTTCTTATCTACGAGTATGTCCCAAATGGAACCCTTTTCGATCACCTCCATAACTCTAGTTCCAGAAAATGGGTCCCCCTCGGAGAAGAGGAGGATGTGAACTTGGTGGTGTTTGTGAAAAGGACTGTGAAGGAAGGGAGGTTGATGGATGCTATTGATCCAAGGTTGAAAATGGGAGCTAATAAGTTGGAGTTGGAGAGTGTGAAAGCGTTGGGGTATCTAGCTACTGCATGCTTGGATGACAAGAGGCAAAATAGGCCTTCAATGAAGGATGTTGCTAATGAGATTGAATATATTATTAATATTATTGTTGCTGACACTGCAAAGGGTGAGGCTTCAGAGGTTTGA 1503 0.485 MAVALLSHSSSVNALKRCPSCGHKPVPYPLSTGPDCGDQSYKVHCNAGTLWFNALNHSSYQIISINPTTQRFTIHPPGFAKSTCMSADFQSNGLMLDPNLPFNITSNNQVVYMNCTAEVSDSWNCTASSICHDYIRDNAAAAKACGPSSHASKICCSIKTGGSSTAYHIKVRKERCSAYESFVNLDILLPVEKWPEPAMELQWQLPMEPVCKVANDCADLPNSACLLDPSSVRRCLCKTGFQWDPINATCQSIAFSGAAMLTGTLLTALASYHRWQRKKRAAVLSMSRARELIADNSGKSAKIFMGKEVTKATNNFSKDNLLGAGGFGEVFRGILDDGTVTAIKRAKLGCTRGIDQILNEVRILCQVNHRSLVRLLGCCVELHEPLLIYEYVPNGTLFDHLHNSSSRKWVPLGEEEDVNLVVFVKRTVKEGRLMDAIDPRLKMGANKLELESVKALGYLATACLDDKRQNRPSMKDVANEIEYIINIIVADTAKGEASEV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01041 500 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 289 391 - -
Bach6g01041 500 Pfam Wall-associated receptor kinase galacturonan-binding 18 74 IPR025287 GO:0030247
Bach6g01041 500 SUPERFAMILY Protein kinase-like (PK-like) 299 407 IPR011009 -
Bach6g01041 500 Gene3D Phosphorylase Kinase; domain 1 277 390 - -
Bach6g01041 500 Gene3D Transferase(Phosphotransferase) domain 1 391 494 - -
Bach6g01041 500 ProSiteProfiles Protein kinase domain profile. 316 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g01041 500 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Bach6g01041 500 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 415 484 IPR045274 GO:0007166
Bach6g01041 500 Pfam Protein tyrosine and serine/threonine kinase 319 406 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01041 Bach-Chr6 8527031 8531955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01041 414 494 Receptor kinase-like Gene Family AT5G02070 53.086 1.23e-22 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bach6g01041 PK_Tyr_Ser-Thr 3.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01041 - - qsa:O6P43_026477 541.191