Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g01026 ATGGCTGAGCGTTTTGAGCCTTACCATGTTCCGCAGCAGAGTAGAAGAGATAAGCTCAGAGTTGTGGGTCAGAACCAACCCGGTCTTGTTGAAGGATGCGCAGGTTTACTCCCTCTGTACGATCCTTCTCTGATTTCCTCCGATTTGCTAAAATGCGCCAACCAAGCTGGTCCCCACTTCCATAACCAGACTACTCCACTTTCTGCTAACAAACCAGACCAAGGTTGTGATGTGAAGGAGGAAGGCTCCAATTTGATGGGATTTGCTGCAGGGGTTATCAATGGTTCTTCTTCTTCATCTTCGTCTTCAGTTTCGGTTTCTCACCACCACGCTTATTTGGATCCTGAGTCGTCTTTGCCAATAAATCCAGGCACAAGCACAATTCAACTTATTGGCAATAACCCGTTTCTTTATCCAACTCAAAACCTTCAGAATCTTAGAGAATTTGGTCAGAGCTACAATGGAAGTGAAATAATGGTGTTCAAGCCAGAGACATTGTCGTTATCCCTTTCCTCCCACAATACCCACCAACCTAATCTTCCTCTTGAGCTGAATCTCCAGCGATATGGGTCTGTGATTTACGGTGACAAGGTTAGTGATGATGGTGGTGGTTGTGTGGTTCCAGGTTTAGTTGGAGGCAGTGCTTCTGCCTCCAATGAAGTTTCCCGGTGCCCGGTCTCTATGGGGCCATTTACGGGTTATGCTTCGATTCTGAAGGGATCGAGGTTCCTGAAGCCCGCTCAGCAGTTATTGGAAGAGCTCTGTGATATTGGGTTTCGCGGAATTCCCGCTGAAATGGTTGCTCCTGATGCTTCTTTAATGGAACCTCCTTCTGAGAGCTTAAGCCAAAGTGGAATTGCAGAGGACGTACTTGCTTCTGGAGATGGAGGTGAAGGGAGGAAGAAGAAGCCAAGGCTATTAACTATGCTTGACGAGATCTACAGGAGGTATAGGCAGTACTATCAACAGATGCATGCAGTAGTAACTTCTTTTGAGTATGTCACGGGCCTTGGTAATGCAGCTCCTTATGCAAGCTTGGCTATCAAAACCATGTCAAAGCACTTCAGATGCTTGAAGAATGCTATAACTGATCAGCTTCAGTTTAACAATAAGGCTCATCTTCACTTAGGCAACAGGAAAGATGAATCTCCGAGGTTTGCCAACAATGATAGAGCCCCGTGTAGCCAAAGACCTCTTCAAAACTCTGGATTTCTTGAGCACCAACCAGTTTGGCGACCTCAAAGAGGACTCCCAGAGCGTGCTGTAACTGTTCTCAGGGCATGGTTGTTTGAGCACTTTCTCCACCCCTATCCTACTGATACGGACAAGTTGATGTTGGCTAAACAAACTGGTCTGTCTCGTGGCCAAGTGTCAAACTGGTTTATCAATGCAAGAGTAAGGCTCTGGAAACCAATGGTGGAAGAAATACATACGCTAGAAACACGGCAAGCTCAAAAAGGTTCGCAAAGGGAAGATCATAATAGGAACAGGTCAAATGATCATTTGCCTTCAGAGAACGCTGTTCTCTCTGAGAATCCATCTACCTCCACTGACAAATTTCAGGATGCTCCCTATAAACGCACTAGAAATGAACTTCCTGATATGCCAGTGAGGAGTCATGAACAACTGAGTCTGCCTTACGCTAGCAACCAGCCTGTGGGTGTTGGGGTGAGCATGGGGAATGCAAGCAATGGTGTTTCACTGACACTAGGTCTACACCAAAATCATGGGATTGAATTGTCTGAACCCTTTCCCATGAATGCAGCTCAACGTTTCGGTCTTGCCCTTGAACCCAACAATGAGGGTTATGTTATGGGTGGCTTTGAATCTCAAACTCGGCATTTTGGACGCGGTGTAATTGGAGGACAACTATTGCATGATTTTGTTGGCTGAAGATCTTCGATCTAATAACTTGCTTGGACTTCATTCATTTGGATGATACACTAACCAAGTTAATGTTGTGCTTTCATCAACCTTCAGAAAGTGAGAAGAAACAAAGAGTGGTTGAGTTATATTTGTCTTTTTATTGTACCAGTAGAGGTATCCTCTAGCATTTGGGGATTATATGGTCTTTTTCATAGTGCCTACAAAGTGAACGAAGGCTGTAAAGTTCATGTATAAATTCATTTAAGAAAAGAAGTGATATTATGTATAAGCTGATCCAAATCACCCTTTGCAATGGCCTTCTGCAGAGGGAACGAGCCCTTGAAATCTTGTCATTTCTCACGTTTGTATGTTTTCTCTTTTTACAATATTGTGAGCCAAACCAAGGAAGGGGTTTTCTTTCTGTATTAGTTGTATTAAGATTGTGCAAGGACT 2319 0.442 MAERFEPYHVPQQSRRDKLRVVGQNQPGLVEGCAGLLPLYDPSLISSDLLKCANQAGPHFHNQTTPLSANKPDQGCDVKEEGSNLMGFAAGVINGSSSSSSSSVSVSHHHAYLDPESSLPINPGTSTIQLIGNNPFLYPTQNLQNLREFGQSYNGSEIMVFKPETLSLSLSSHNTHQPNLPLELNLQRYGSVIYGDKVSDDGGGCVVPGLVGGSASASNEVSRCPVSMGPFTGYASILKGSRFLKPAQQLLEELCDIGFRGIPAEMVAPDASLMEPPSESLSQSGIAEDVLASGDGGEGRKKKPRLLTMLDEIYRRYRQYYQQMHAVVTSFEYVTGLGNAAPYASLAIKTMSKHFRCLKNAITDQLQFNNKAHLHLGNRKDESPRFANNDRAPCSQRPLQNSGFLEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRGQVSNWFINARVRLWKPMVEEIHTLETRQAQKGSQREDHNRNRSNDHLPSENAVLSENPSTSTDKFQDAPYKRTRNELPDMPVRSHEQLSLPYASNQPVGVGVSMGNASNGVSLTLGLHQNHGIELSEPFPMNAAQRFGLALEPNNEGYVMGGFESQTRHFGRGVIGGQLLHDFVG 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g01026 630 SMART HOX_1 411 475 IPR001356 GO:0003677
Bach6g01026 630 CDD homeodomain 411 472 IPR001356 GO:0003677
Bach6g01026 630 Pfam Homeobox KN domain 428 467 IPR008422 GO:0003677|GO:0006355
Bach6g01026 630 MobiDBLite consensus disorder prediction 501 521 - -
Bach6g01026 630 Pfam Associated with HOX 237 363 IPR006563 -
Bach6g01026 630 SMART prehox3 232 364 IPR006563 -
Bach6g01026 630 ProSiteProfiles 'Homeobox' domain profile. 408 471 IPR001356 GO:0003677
Bach6g01026 630 FunFam BEL1-like homeodomain protein 9 414 476 - -
Bach6g01026 630 SUPERFAMILY Homeodomain-like 413 477 IPR009057 -
Bach6g01026 630 MobiDBLite consensus disorder prediction 480 500 - -
Bach6g01026 630 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 108 493 - -
Bach6g01026 630 Gene3D - 414 476 - -
Bach6g01026 630 MobiDBLite consensus disorder prediction 480 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g01026 Bach-Chr6 8396769 8401357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g01026 149 630 Homeobox Transcription Factor Family AT5G02030 47.876 3.65e-117 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach6g01026 POX 4.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g01026 - - tcc:18597667 839.721