Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00984 GCGCTCTCCCTTTTCCCCACATCAAACTAAACTAAATTTTCTAACTTCTGCTGTGAATTCCGATCGAGCCAGTTCGTTCTTGCATTGCGACGCAAAAGGGAAAGTTTGTTTCACCTCAGCAAGGTCGAGAGTTGTGGATAAGTAGTTGATTGAATATGCTTCAGATTCGGCTTAGTAAGGTTCCTGCCTCAGAAGGTTCAGCAGGGGGGAAGCCCTCACCTGTTGAGGCTGTTAATGTTGCATGCCCTGACCACCTAGTCCTTGCTGAACTACCTGTAGCAAAGGGCATTGGTGCGGCAACTTCTGCTTCCCTTGTCAAGACTCTTGGCCGTAGATCACGCCGCCAGCTCGGTGAGCGTGCGCATTTTTGTGTTCGTTGTGATTTCCCAATTGCCATCTATGGACGCCTGAGCCCTTGTGAGCATGCCTTCTGTCTCGATTGTGCAAGAAGTGATTCTCTTTGCTACTTGTGTGATGAACGGATCCAGAAGATTCAGACAATCAAAATGATGGAAGGAATTTTCATCTGTGCAGCTCCTCACTGTCTAAAATCTTTCTTGAGGAAGGTGGACTTCGAATCTCACATCCAAGACACCCATTCTGACCTTCTTCGACTCAACACAGATAAAGAAGATGGAAATGAGTCAGAGGCACAGAGCGTTAGGCAACCTTCAGCTTCAGATTCTACTGTTCGTGGTCCCCAAAGGCCAGTTTTTTCTCCAGGTTCAAATTCCCAGCAACATGATCGGGAAGATAAAACTCGTCGACAGACACCAAGGGAGCAGCAACCTCCAAGGTCAGCACTTCAGGGAAAGCCACCATTTTTTGGTCAAGTTCAAAATCACCCTTCAGATCCCCAATCCAACGCTGGAGGTATTCAACAGCGGTTCCATCAACAAGGTGCTCCTCAAGATCCTTCCCAGTTTGTAGACAGGCCGCAGGGAGTTGTTCCAGATGGCCCGTTTCAAGAATATCCTCCCATGCATTCTGCACACCCACCCAACTATTCCATGCCAGTCAATTCAAACCCAGGTTTGAACCCTCCTTTACCTTTTGGTTATCCCCCTTACCCGCATGAAGGAGCTCAACCATTTTATCCTGCTCCATATGAGATTCCTCGGCAGGACTCAGCTTCTGAAATGGGTACAGATCAGGGTTCATTACTGGGTTTCCCGCCAGCTCCAGGCAGCGGAGCAAATTTTCCAGCCAATTATCCCCAGCCATGGCATGCTGGAATGGCCGGTATGCCTTTTGAGCAAGCACAGGGTGGTATGGGTATGGACCCAAGGGATGCCAAGGGCATATTGGCACCACAGCCCATGTCCCTCCCACCTCCTCCTCCACCCCCATCTCACATGTCACATCCCTATGCCAGTGATGGCCAGGGTTTTGGGTGGCCGCACGATAGCCGTGATTCTTTTGGGAGTGGCCAGGACTAG 1439 0.4983 MLQIRLSKVPASEGSAGGKPSPVEAVNVACPDHLVLAELPVAKGIGAATSASLVKTLGRRSRRQLGERAHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDERIQKIQTIKMMEGIFICAAPHCLKSFLRKVDFESHIQDTHSDLLRLNTDKEDGNESEAQSVRQPSASDSTVRGPQRPVFSPGSNSQQHDREDKTRRQTPREQQPPRSALQGKPPFFGQVQNHPSDPQSNAGGIQQRFHQQGAPQDPSQFVDRPQGVVPDGPFQEYPPMHSAHPPNYSMPVNSNPGLNPPLPFGYPPYPHEGAQPFYPAPYEIPRQDSASEMGTDQGSLLGFPPAPGSGANFPANYPQPWHAGMAGMPFEQAQGGMGMDPRDAKGILAPQPMSLPPPPPPPSHMSHPYASDGQGFGWPHDSRDSFGSGQD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00984 427 MobiDBLite consensus disorder prediction 194 208 - -
Bach6g00984 427 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Bach6g00984 427 FunFam E3 ubiquitin-protein ligase Hakai 69 123 - -
Bach6g00984 427 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 123 IPR013083 -
Bach6g00984 427 MobiDBLite consensus disorder prediction 166 193 - -
Bach6g00984 427 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 149 IPR013087 -
Bach6g00984 427 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 415 IPR040383 GO:0016567|GO:0061630
Bach6g00984 427 MobiDBLite consensus disorder prediction 1 21 - -
Bach6g00984 427 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Bach6g00984 427 CDD RING-HC_HAKAI-like 70 119 IPR040380 -
Bach6g00984 427 MobiDBLite consensus disorder prediction 366 427 - -
Bach6g00984 427 MobiDBLite consensus disorder prediction 387 402 - -
Bach6g00984 427 MobiDBLite consensus disorder prediction 228 255 - -
Bach6g00984 427 MobiDBLite consensus disorder prediction 158 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00984 Bach-Chr6 8067322 8071219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00984 1 423 C2H2 Transcription Factor Family AT5G01160 47.100 4.78e-117 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00984 K15685 - gmx:100817582 612.068