Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00966 CTTTAATCCCTATATCCTTTCCGTCTCTAATAACTAGGTTTTGTTCCAATTGCTTTAGGGTTTGGATTTTGGATTGTTCGAGCTTTGTCAAATTAGGGTTTTCTGATCGACAAAATTTGAGGCAATCTTTGAATTCTGTGGTTTTGGGTCTTTCGATTTCGGTAAGCAGTGAAAAATGCCTCCAAGAACTGTGAAGAGAGGGGCTGCCTCATCTGGGGGAAAGAGGGGGGCCCGAGGCAACAGGGGGACGGCTAAGGCGGCTTCCCAGAACCTGCAGCAGGCTGAAGCTGCGGTAGAGATGGTGAATCATGAAGAAAAGCCGGTTCCTGAGGAGGAGGTCAAAGTCGAAGAGAAGCCAGTTGTTGTGGAGAAACCAGTCGTAGTGGAAAAACCTGTTTATGAGGAGAAGTCTATTGATATAAATCAAATGGCTACAGAGCATGAAGTTGAAGAAAAGTCTATAACTAATGGATCAGCTGTGGTGAAAAACGATGAAGAGGAGGTTAAGGAGGCAATAGATGAATATGAAAAAGATGAACGTTTAGAATTGGAGGATAATGATCCTGAGTATGAACCAGAGGAGTATGGTGCAGTTGATTATGATGAGAAGGAAATTGAACAAGATGAGGTTCAGGAGGTGGGAGATGAGGTGGAAGAAGAACCTCAGGAAAATGTAGATGGAGAGGAGGGTGATATGGGTGAGGAGGAGGTGGAAGATGTACATGAGGAACTCGAGGGAGAAGAGGATGATGAGCATGCAGGTGAGGAGCATGATCATGCAGCAATGGTTGATGTAGATGAGGATGAACACCATAAAGTTGTTAAGGAGAGGCGCAAACGCAAGGAGTTTGAAGTATTTGTTGGGGGCTTAGACAAGGATGCTACTGAGGATGATCTGAGGAAGGTTTTTAAATCAGTTGGTGAGGTTACTGAAGTAAGGCTGATGATGAATCCTCAGACTAAAAAGAACAAGGGCTTTGCTTTCTTGCGTTTTGCAACTGTGGAGCAAGCTAGACGAGCTGTAACAGATTTAAAGAACCCAGTGATTAATGGTAAACAGTGTGGTGTTACTCCAAGTCAGGACAGTGATACCCTCTTTTTGGGTAATATATGCAAGACATGGACAAAGGAGGCTTTAAAGGAGAAGTTGAAACATTACGGTGTTGAGGCTGTTGAGGATTTAACTTTAGTGGAAGATAGCAACAACGAGGGAATGAACCGTGGATTTGCCTTTTTAGAATTTTCGTCTCGCTCTGATGCTATGGATGGCTTTAAACGACTACAGAAGAGAGATGTTGTGTTTGGAGTCGATAGGCCTGCAAAGGTTTCTTTTGCAGATTCCTTTATTGACCCGGGTGATGAAATCATGGCGCAGGTTAAAACTGTATTTATTGATGGTTTGCCACCTTCATGGGATGAGGATCGCATCCGTGAACTTCTTAAGAAGTATGGGGCAATTGAAAAGATTGAACTTGCCAGAAACATGCCTTCTGCTAAAAGGAAGGACTTTGGATTTGTAACCTTTGACACCCATGATGCTTCTGTGACATGTGCTAAAAGCATTAATAATGCAGAGTTGGGCGAAGGAGACATCAAGGCAAAGGTTAGAGCCAGGCTTTCAAGACCACTTCAGAGAGGGCGAGGGAAACATGTTACTCGAGGGGACTACCATTCTAGCCGAAGTTCTGGAAGAGTTTCCACAAGGCCTTCATGGGGTCGACCTGCACCACGTAGTCTCCCTACCCGTGGGATAAGAGGCATTGGAAGTCGTGTCCCATCAGTTAGGCCTGTCAGTGTGAGAGATAGACGTCCTGTCATGTCCATGCCAGTGAGAGCCAGGCCGGTGGCACCACCAGCTAGATCCTATGACAGGAGGCCTGCTGTTCCTTCATATCCTAAGAGTAGCATGAAGAGAGACTATGGTCGAAGAGAGGATATGCCACCTCCAAGAAGCAGAGTCGCTGTAGATTATGGTGCTAGGGTGCCTTCTGAAAGACGCCCATCATCATATAGGGATTACCCATCCCGTGGCCCTGGCTATACTGAGCTCCCTAGAAGTACGTCTCGTGCTGCTCCCAGGAGAAGTTATGTGGATGATAGCTATGGGCAAAGATTTGAGAGGGCTCCTCCCCCTCCCCCTCCAAGCTACCGTGAAGGACGTTCTCGCGACTATGACACTATTTCTGGGTCGAAACGTCCATATACTGCCATAGATGATGTTCCTCCACAATATGCAGATACTGGTGCCCGCCAATCAAGAGCTCGATTAGACTATGATTATGGAGGAAGTGCTTCTCAGTATGGAGATGCTTATGGTGATAGACTTGGAAGATCTAGTATGGGATATGGTACCAGTAGAAGTTCTATGTCAAGTCAGGACTCACATGGGATGTATGGCAGTCGTCAGGGCATGAGTTATGGTGGAGGTTCTTTCGGCAGTAGTGATGTTGGTGGTATGTACTCATCAAGTTATGGTGGTGATTATATGCCTCGTGGAAGTGATGTTGGTGGCAGCTCATACTCATCCATGTATTCAGGCAGGGGTGTGGGTGGTAGCAGTTACATGGGTGGTAGTGGATCTGGGCCTTATTATTGAGAGATCTGATATAATAAGAGGCTGCTGTAGGATGTGGACTTTTGGAGCTTATGCACGTTATGCCTACAGTGTCAAGACAAAGGAACATTGCTAAGTAATAGCCTCTTTTGGGAAATTCTCACAATACAAAGCATTTATCAGTTCAAGTTATCTTGGGTCTTCTCTGGATGTATTGTCAGTTCTTGAATTTTTGCTGTAAGGACTCAAGTTATTTAGACATTGAAATGGAAAGTGCTGAGTATGTGATGTGTATCTTAAACCTCATTTTATCAATATAAGAGTTCCGTCCGATTGGTTAATGTGGAAGACTGCTGCATCTTCTGTAAATTAGGA 2929 0.4496 MPPRTVKRGAASSGGKRGARGNRGTAKAASQNLQQAEAAVEMVNHEEKPVPEEEVKVEEKPVVVEKPVVVEKPVYEEKSIDINQMATEHEVEEKSITNGSAVVKNDEEEVKEAIDEYEKDERLELEDNDPEYEPEEYGAVDYDEKEIEQDEVQEVGDEVEEEPQENVDGEEGDMGEEEVEDVHEELEGEEDDEHAGEEHDHAAMVDVDEDEHHKVVKERRKRKEFEVFVGGLDKDATEDDLRKVFKSVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARRAVTDLKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVEAVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDGFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFIDGLPPSWDEDRIRELLKKYGAIEKIELARNMPSAKRKDFGFVTFDTHDASVTCAKSINNAELGEGDIKAKVRARLSRPLQRGRGKHVTRGDYHSSRSSGRVSTRPSWGRPAPRSLPTRGIRGIGSRVPSVRPVSVRDRRPVMSMPVRARPVAPPARSYDRRPAVPSYPKSSMKRDYGRREDMPPPRSRVAVDYGARVPSERRPSSYRDYPSRGPGYTELPRSTSRAAPRRSYVDDSYGQRFERAPPPPPPSYREGRSRDYDTISGSKRPYTAIDDVPPQYADTGARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGTSRSSMSSQDSHGMYGSRQGMSYGGGSFGSSDVGGMYSSSYGGDYMPRGSDVGGSSYSSMYSGRGVGGSSYMGGSGSGPYY 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00966 806 FunFam RNA recognition water-stress protein1 392 514 - -
Bach6g00966 806 CDD RRM_SF 227 298 - -
Bach6g00966 806 FunFam Heterogeneous nuclear ribonucleoprotein Q isoform A 158 305 - -
Bach6g00966 806 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 225 303 IPR000504 GO:0003723
Bach6g00966 806 MobiDBLite consensus disorder prediction 119 194 - -
Bach6g00966 806 SUPERFAMILY RNA-binding domain, RBD 303 474 IPR035979 GO:0003676
Bach6g00966 806 CDD RRM_SF 307 385 - -
Bach6g00966 806 FunFam Heterogeneous nuclear ribonucleoprotein Q 306 388 - -
Bach6g00966 806 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 305 389 IPR000504 GO:0003723
Bach6g00966 806 Gene3D - 138 305 IPR012677 -
Bach6g00966 806 Coils Coil 26 46 - -
Bach6g00966 806 MobiDBLite consensus disorder prediction 104 118 - -
Bach6g00966 806 MobiDBLite consensus disorder prediction 722 739 - -
Bach6g00966 806 MobiDBLite consensus disorder prediction 1 37 - -
Bach6g00966 806 Gene3D - 306 388 IPR012677 -
Bach6g00966 806 SMART rrm1_1 226 299 IPR000504 GO:0003723
Bach6g00966 806 SMART rrm1_1 403 476 IPR000504 GO:0003723
Bach6g00966 806 SMART rrm1_1 306 385 IPR000504 GO:0003723
Bach6g00966 806 CDD RRM_SF 404 476 - -
Bach6g00966 806 MobiDBLite consensus disorder prediction 482 692 - -
Bach6g00966 806 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 402 484 IPR000504 GO:0003723
Bach6g00966 806 MobiDBLite consensus disorder prediction 86 196 - -
Bach6g00966 806 Coils Coil 100 123 - -
Bach6g00966 806 Gene3D - 394 511 IPR012677 -
Bach6g00966 806 MobiDBLite consensus disorder prediction 578 592 - -
Bach6g00966 806 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 227 295 IPR000504 GO:0003723
Bach6g00966 806 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 307 372 IPR000504 GO:0003723
Bach6g00966 806 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 404 470 IPR000504 GO:0003723
Bach6g00966 806 MobiDBLite consensus disorder prediction 720 739 - -
Bach6g00966 806 SUPERFAMILY RNA-binding domain, RBD 220 303 IPR035979 GO:0003676
Bach6g00966 806 Coils Coil 142 162 - -
Bach6g00966 806 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 66 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00966 Bach-Chr6 7860374 7865266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00966 227 473 Eukaryotic Initiation Factors Gene Family AT3G16380 23.574 2.15e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00966 - - gmx:100779340 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00966 6 7860374 7865266 Bach6g00966 6 7860374 7865266 ECH