Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00927 TAGGGTTTTTTAAGGTGTAGGAGTATTGGTTTTCGGATTGTTGTTATCTTCTTCAATGGTTTTTGGATTTGGGTATTTGGGATTGTTGTCTTGGTGAATTACTTCAGTGGTTATAAGATTTGGGTTTTTGAGTTTGAAGGTATTGGAGTCTGTTTTTACTTTGAATTTGTTGAGATATGAGTCGTAGGGTGAGGAGGAAGGTCGCTAGGAAAGGAAAAGAGAAGCTAGTGTTGCCGACCTACCCTGAATTTCAAGACGAGGTTTTGGAATTGGACGGAGAAGGGGATGTTGATTGGAAGAGCTTACCCGATGATACAGTAATTCAGCTGTTTTCATGTTTAAGTTATCGTGACCGAGCAAGCTTGTCATCAACATGTAAGACATGGAGGTTGCTTGGTCGCTCTCCATGTTTATGGAACTCTCTTGATCTTCGTTCCCACAGGTTTGATGCTTCCATGGCATCTTCACTTGCTCCCAGGTGTATGCACCTTCAGAGGCTTAGATTTCGTGGGGCAGAGTCTGCTGATGCGATAATACATCTTCAAGCTAGGAATTTGCGTGAAATAAGTGGTGACTATTGCAGGAAAATTACTGATGCAACTCTCGCTGTAATTGTAGCTCGGCATGAGGCACTTGAGAGTCTTCAGCTTGGGCCAGATTTCTGTGAGAGAATCAGTAGTGATGCTATAAAAGCTATTGCTCATTGCTGTCCTACACTAAAGAAACTTCGACTCTCAGGAATTAGGGATGTAAATGGTGATGCCGTCAATGCCTTGGCCAAGCATTGTCCAAAATTAACTGATATTGGATTCATTGACTGTCTCAATGTTGATGAGCTTGCATTGGGAAATGTGTTATCAGTTCGTTTCCTTTCTGTTGCGGGGACTTCAAGCATGAAGTGGGGCGCAGTTTCCCATCTTTGGCATAAACTGCCAAACCTGTCTGGGCTAGATGTTTCTAGAACTGATATTGGCCCATCTGCTGTTTCAAGATTGTTATCCTCATCAGAGAGCTTGAAGGCTTTGTGTGCTCTGAATTGTCCTATTCTTGAAGAGGACACCAGCTTTGCTGCAAATAAATATAAAAATAAGTTATTGATTGCCCTTTTTACTGACATTTTTAAAGGACTAGCTTCTTTATTTTTTGATGATACAAAGAAAGGAAAGAATGTGTTTTTAGACTGGAGGAATTCAGAGAAGAATGATAAGGAATTAAATGAAATCATGATCTGGCTTGAGTGGATTCTATCCCACACACTTTTGCGATCTGCTGAGAGCTCTCAACAGGGACTTGATAGTTTCTGGGTTGAACAAGGTGGAGCGCTCTTACTTAGTCTAATGCAGAGTTCTCAAGAGGATGTTCAAGAGAGGGCAGCCACAGGGCTTGCAACTTTTGTTGTAATTGATGACGAAAATGCTAGCATAGATTGTGGAAGGGCAGAAGCAGTTATGCGAGATGGTGGCATAAGGCTCCTACTGGACTTGGCCAAATCCTGGAGGGAAGGACTTCAGTCTGAGGCAGCTAAGGCCATTGCAAATTTGTCTGTCAATGCCAATGTTGCCAAAGCTGTTGCGGAAGAGGGTGGGATTGATATTCTTGCTGGTTTGGCTAGGTCCATGAACAAGCTAGTAGCTGAAGAGGCTGCTGGAGGACTGTGGAATCTCTCTGTTGGAGAAGAACACAAGGGTGCCATTGCTGAGGCTGGAGGAATACAAGCTCTGGTAGATCTCATATTCAAGTGGTCCTCTAGTGGAGATGGAGTTTTGGAACGTGCAGCTGGTGCATTGGCAAATTTAGCTGCTGATGACAAGTGTAGTACAGAGGTGGCATCGTCAGGTGGGGTGCATGCTTTAGTGATGCTTGCTCGTAACTGCAAGTTTGAGGGGGTACAAGAGCAGGCTGCTCGGGCTTTGGCCAATTTGGCTGCTCATGGTGATAGCAACAGTAATAATGCAGCTGTTGGACAAGAAGCAGGTGCTCTTGAGGCACTTGTTCAGCTTACACGTTCTCCCCATGATGGTGTCAGACAAGAAGCTGCTGGTGCACTCTGGAATTTGTCATTTGATGATAGAAACCGAGAAGCAATTGCAGCAGCTGGTGGAGTTCAGGCCTTGGTTGCTCTTGCCCAGTCTTGCTCTAGTGCATCCCCTGGCCTTCAAGAGAGGGCTGCAGGTGCTCTCTGGGGATTGTCGGTTTCTGAAGCTAACAGCATTGCAATTGGACGAGAAGGAGGTGTTGCACCTCTAATAGCACTAGCACGGTCTGAAGCTGAGGACGTTCATGAAACTGCTGCAGGAGCACTCTGGAATCTTGCTTTCAATCCTAGTAATGCTCTACGAATAGTGGAGGAAGGAGGAGTTTCTGCACTAGTAGATCTCTGTTCCTCATCAGTATCAAAAATGGCACGTTTCATGGCTGCATTGGCATTGGCTTACATGTTTGATGGGAGGCTATGTCCTGACGAGAAGAAAACAAGAATGGATGAATTTGCTTTAGTAGGCACCTCATCAGAAAGCATTCCCAAGAGCGTGAGCTTGGATGGAGCTAGAAAGATGGCTTTGAAACACATTGAAGCTTTCGTCCTTATGTTTTCTGATCCCCAAGCATTTGCTGCTGCTGCTGCATCATCAGCGCCTGCAGCACTGGCCCAAGTTACTGAAGGTGCTCGTATTCAAGAAGCAGGACATCTGAGATGCAGTGGTGCGGAAATTGGAAGATTTGTTGCTATGCTACGAAACCAATCATCCATACTCAAAGCTTGTGCTGCATTTGCACTTCTCCAGTTTACAATTCCTGGTGGACGACATGCTATGCACCATGCTAGCCTCATGCAGAATGCAGGAGCAGCAAGGGTTCTCCGTGGTGCGGCTGCATCAGCAATAGCACCACTTGAAGCCAAAATCTTTGCCAGAATTGTTCTTCGCAATCTTGAGTTCCACCAGATAGAGCAAACAATCTAAAGATCAATTCTGGTATCCGTTTCATTTGGAGACACAACTGTTGAAAACTCTACTCCCAGACCATGATGTAAATGAAGTGTAATTCATAGATTATTGTTCACCTGATCTTTCAACTCCATCTGAATCATTTAGCTTAATTTTGACATGTAGTTTTGTTTCTGCAACAGTCTTTTTCTTATCAAGGCTGCACTGCACTAGATCTAAGAATTATTGCCTTGATGTTTATCTTTGTATTATAATTCTGTATAATTATAGATTTCAAGCTATTTTC 3231 0.4401 MSRRVRRKVARKGKEKLVLPTYPEFQDEVLELDGEGDVDWKSLPDDTVIQLFSCLSYRDRASLSSTCKTWRLLGRSPCLWNSLDLRSHRFDASMASSLAPRCMHLQRLRFRGAESADAIIHLQARNLREISGDYCRKITDATLAVIVARHEALESLQLGPDFCERISSDAIKAIAHCCPTLKKLRLSGIRDVNGDAVNALAKHCPKLTDIGFIDCLNVDELALGNVLSVRFLSVAGTSSMKWGAVSHLWHKLPNLSGLDVSRTDIGPSAVSRLLSSSESLKALCALNCPILEEDTSFAANKYKNKLLIALFTDIFKGLASLFFDDTKKGKNVFLDWRNSEKNDKELNEIMIWLEWILSHTLLRSAESSQQGLDSFWVEQGGALLLSLMQSSQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLDLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIDILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVASSGGVHALVMLARNCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHDGVRQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQSCSSASPGLQERAAGALWGLSVSEANSIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPSNALRIVEEGGVSALVDLCSSSVSKMARFMAALALAYMFDGRLCPDEKKTRMDEFALVGTSSESIPKSVSLDGARKMALKHIEAFVLMFSDPQAFAAAAASSAPAALAQVTEGARIQEAGHLRCSGAEIGRFVAMLRNQSSILKACAAFALLQFTIPGGRHAMHHASLMQNAGAARVLRGAAASAIAPLEAKIFARIVLRNLEFHQIEQTI 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00927 927 Gene3D Ribonuclease Inhibitor 33 311 IPR032675 -
Bach6g00927 927 SUPERFAMILY RNI-like 49 293 - -
Bach6g00927 927 Gene3D - 676 780 IPR011989 -
Bach6g00927 927 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 510 555 IPR000225 GO:0005515
Bach6g00927 927 Pfam Armadillo/beta-catenin-like repeat 592 628 IPR000225 GO:0005515
Bach6g00927 927 Pfam Armadillo/beta-catenin-like repeat 463 497 IPR000225 GO:0005515
Bach6g00927 927 Pfam Armadillo/beta-catenin-like repeat 676 713 IPR000225 GO:0005515
Bach6g00927 927 Pfam Armadillo/beta-catenin-like repeat 422 456 IPR000225 GO:0005515
Bach6g00927 927 Pfam Armadillo/beta-catenin-like repeat 630 672 IPR000225 GO:0005515
Bach6g00927 927 Pfam Armadillo/beta-catenin-like repeat 500 542 IPR000225 GO:0005515
Bach6g00927 927 Pfam Armadillo/beta-catenin-like repeat 544 584 IPR000225 GO:0005515
Bach6g00927 927 SMART fbox_2 43 83 IPR001810 GO:0005515
Bach6g00927 927 FunFam Protein ARABIDILLO 2 355 502 - -
Bach6g00927 927 Pfam F-box-like 40 86 IPR001810 GO:0005515
Bach6g00927 927 ProSiteProfiles F-box domain profile. 37 83 IPR001810 GO:0005515
Bach6g00927 927 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 685 727 IPR000225 GO:0005515
Bach6g00927 927 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 554 585 IPR000225 GO:0005515
Bach6g00927 927 PANTHER PROTEIN ARABIDILLO 1 1 924 - -
Bach6g00927 927 SUPERFAMILY ARM repeat 383 745 IPR016024 -
Bach6g00927 927 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 428 470 IPR000225 GO:0005515
Bach6g00927 927 SMART arm_5 417 457 IPR000225 GO:0005515
Bach6g00927 927 SMART arm_5 589 629 IPR000225 GO:0005515
Bach6g00927 927 SMART arm_5 458 498 IPR000225 GO:0005515
Bach6g00927 927 SMART arm_5 499 542 IPR000225 GO:0005515
Bach6g00927 927 SMART arm_5 543 584 IPR000225 GO:0005515
Bach6g00927 927 SMART arm_5 715 756 IPR000225 GO:0005515
Bach6g00927 927 SMART arm_5 674 714 IPR000225 GO:0005515
Bach6g00927 927 SMART arm_5 630 673 IPR000225 GO:0005515
Bach6g00927 927 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 641 686 IPR000225 GO:0005515
Bach6g00927 927 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 600 642 IPR000225 GO:0005515
Bach6g00927 927 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 469 511 IPR000225 GO:0005515
Bach6g00927 927 SMART LRR_CC_2 252 276 IPR006553 -
Bach6g00927 927 SMART LRR_CC_2 178 203 IPR006553 -
Bach6g00927 927 SMART LRR_CC_2 204 229 IPR006553 -
Bach6g00927 927 SMART LRR_CC_2 124 149 IPR006553 -
Bach6g00927 927 SMART LRR_CC_2 150 177 IPR006553 -
Bach6g00927 927 CDD F-box_AtADLO1-like 39 80 - -
Bach6g00927 927 Gene3D - 357 675 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00927 Bach-Chr6 7391191 7399366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00927 571 758 U-box Gene Family AT2G23140 35.979 1.90e-20 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00927 - - gmx:100819086 1550.03