Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00918 ATTTAAGAGAAGCTTGGTGGATTTTCTTTTTCTTTTGTTTGTTAGAGATGGGGGAGAAAGATGATGGGTTGGGATTGGGGTTGAGTTTGAGCTTCGGTTCCACTCCATTGAACGACAATCTCATGCGGAAGCCTCCTCAATCTGTTTCCAATCAGAAGTGTTCATGGAATGATTTGTTTCAGTTACCTGATCGTACCTCCGAGGCGAGGTCGTTCCTTCGCGGAATAGACGTGAATTTAGCGCCGTCGACCACGGTGGTAGTGGACTGTGATGACGACAACGGTGTTACATCACGTAACAGTACGATGTCGAGTATCAGTGGGAAGCGGAGCGAGAGAGAAGGAGATGGAGACGAACACGAAGCCGAGAGGGCTTCATGCTCCCGAGGCAGCGACGACGAGGACGGCGGCGGCGGAGTCGAAAACTCAAGGAAGAAGCTCAGGCTCTCAAAGGAACAAGCCGTGGTTCTGGAGGAGACCTTCAAGGAACACAACACACTCAATCCGAAACAAAAGCAAGCACTGGCAAAACAGCTGAATCTGACGGCTAGACAAGTGGAGGTGTGGTTCCAGAACAGACGAGCAAGGACCAAGTTGAAGCAAACTGAAGTGGACTGTGAATACTTGAAGAGATGCTGTGAGAATCTGACTGAGGAGAATAGGAGGCTTCAAAAGGAGGTGCAAGAGCTTAGGGCATTGAAATTATCCCCACAGCTCTACATGCACATGAACCCTCCCACCACTCTCACAATGTGCCCTTCATGCGAGCGTGTTGCCGGCTCATCCACCTCCTCCTCGTCAGCCACCGCAACTGCTCCCGCTCTGCCTAACCGCAACCCTAACATCCAGCGGCCAGTGCCTGTCAACCCTTGGGCCTCCATGTCGATCCAACACCGAGCCTTTGGCAGCCCTGCCCGTGATTGTTCACTTTTAGTCAGGGCAATATGGTGAAAGTTCGGAATTGAAACAAGAGCACTATATTAAAAGAAATGAATTGGCAATAGCAAAGAAAGAGTTCAAGTTAGTGATGGTTTGTTAGGACTTTTGCTTAACTCCTAAGGCTTATTTTATTATGGGCCCCAAGTATATTTTCTAGTAAACTTTGGTTAGAGTAAGAGAGAGGGAGTTCCTGTAAAGGGTGGACAAGTTAAAGCAGTGTGAGTGTATTTTTCCAGATGCTGAACAGTTTGTTTAGCTTAATAGATTGATGACAAATAGAATGAGAATATGTTCTAATTTGGTCATAGGAAGTGTGGGTGATTATGATACCACTTGCAAAAAGGTGGGGATTTTGTGCAGATTTCAGGGTGATTCCCATGGGAATGTGATCTTAATTATTATGATCTTGTCTGCCTTTACTTATAAGTCATAGACAGCACTATAAATGTAAATGAATTAATA 1400 0.4614 MGEKDDGLGLGLSLSFGSTPLNDNLMRKPPQSVSNQKCSWNDLFQLPDRTSEARSFLRGIDVNLAPSTTVVVDCDDDNGVTSRNSTMSSISGKRSEREGDGDEHEAERASCSRGSDDEDGGGGVENSRKKLRLSKEQAVVLEETFKEHNTLNPKQKQALAKQLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPSCERVAGSSTSSSSATATAPALPNRNPNIQRPVPVNPWASMSIQHRAFGSPARDCSLLVRAIW 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00918 300 SMART halz 184 227 IPR003106 GO:0006355|GO:0043565
Bach6g00918 300 Coils Coil 190 220 - -
Bach6g00918 300 Pfam HD-ZIP protein N terminus 1 98 IPR006712 GO:0005634
Bach6g00918 300 ProSitePatterns 'Homeobox' domain signature. 159 182 IPR017970 GO:0000981|GO:0006355
Bach6g00918 300 SMART HOX_1 126 188 IPR001356 GO:0003677
Bach6g00918 300 Gene3D - 110 188 - -
Bach6g00918 300 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 28 258 - -
Bach6g00918 300 MobiDBLite consensus disorder prediction 75 131 - -
Bach6g00918 300 MobiDBLite consensus disorder prediction 1 34 - -
Bach6g00918 300 MobiDBLite consensus disorder prediction 75 92 - -
Bach6g00918 300 MobiDBLite consensus disorder prediction 246 268 - -
Bach6g00918 300 MobiDBLite consensus disorder prediction 93 131 - -
Bach6g00918 300 Pfam Homeobox associated leucine zipper 184 218 IPR003106 GO:0006355|GO:0043565
Bach6g00918 300 MobiDBLite consensus disorder prediction 15 34 - -
Bach6g00918 300 CDD homeodomain 128 185 IPR001356 GO:0003677
Bach6g00918 300 ProSiteProfiles 'Homeobox' domain profile. 124 184 IPR001356 GO:0003677
Bach6g00918 300 Pfam Homeodomain 128 182 IPR001356 GO:0003677
Bach6g00918 300 FunFam Homeobox-leucine zipper protein 18 113 189 - -
Bach6g00918 300 SUPERFAMILY Homeodomain-like 115 185 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00918 Bach-Chr6 7308613 7311141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00918 30 287 Homeobox Transcription Factor Family AT3G60390 66.545 8.32e-106 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach6g00918 HD-ZIP_N 4.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00918 K09338 - pvy:116146403 376.711