Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00900 ATGGAAAGTGATGCTCAAGACAACTTCTCTAGCTCCTCCTCCTTCACTTCCTCCACCACCATCGCCGCGGCCGCTGCCACCACCTCCTCCTCTTCATCCTTCTCTTCATCATCATCAACTAGAGTAACCACATCTGCTACTTCAAACTCAAATTCAGGTGCCAAGCAAGACTGTGAAAGCCCTCAAAACGGTTCAACAGGAGCTCAAGACATGGAAAATGGCAAGGAGTGCAAGAAAAGGCAGAGAAGTGATAATGAAGGAAAGCATCCTACATATAGAGGTGTTAGAATGAGGAATTGGGGTAAATGGGTGTCAGAGATCAGGGAACCCAGAAAGAAATCAAGAATATGGCTTGGAACATACCCTTGTGCAGAAATGGCAGCTAGAGCCCATGATGTAGCTGCTTTAGCTATCAAGGGTCACTCAGCTTACCTCAATTTCCCTGAATTGGCTCAAGAGCTTCCCCGGCCGGCGAGCACATCTCCGAAGGATATCCAAGCTGCAGCTGCAAAGGCAGCAGCCACTGTACTTGAGGAGGTTAAGCATTCTCAAGCTGAAGCTGAACCTTGCCAAGCTGAGCAAGCTTCATCTTCAACTCTCTCCTTGGATAATAATACTCAAGACTCTAATAACAGTTCTCCCTCTTCTAATGAAGATGACACATTGTTCGACCTACCAGATCTTTTCACTGATGGAAACAATGGACTTTGCTCCTATTCTTCTTCATGGCATTTGTGTACAGTTGATAGTGTTTTCCGTCTTGAAGAGCCATTTTTTTGGGAGAAGTATTAG 792 0.4571 MESDAQDNFSSSSSFTSSTTIAAAAATTSSSSSFSSSSSTRVTTSATSNSNSGAKQDCESPQNGSTGAQDMENGKECKKRQRSDNEGKHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPCAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPASTSPKDIQAAAAKAAATVLEEVKHSQAEAEPCQAEQASSSTLSLDNNTQDSNNSSPSSNEDDTLFDLPDLFTDGNNGLCSYSSSWHLCTVDSVFRLEEPFFWEKY 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00900 263 Gene3D AP2/ERF domain 91 149 IPR036955 GO:0003700|GO:0006355
Bach6g00900 263 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 75 232 - -
Bach6g00900 263 SMART rav1_2 91 154 IPR001471 GO:0003700|GO:0006355
Bach6g00900 263 SUPERFAMILY DNA-binding domain 91 149 IPR016177 GO:0003677
Bach6g00900 263 MobiDBLite consensus disorder prediction 189 220 - -
Bach6g00900 263 MobiDBLite consensus disorder prediction 1 95 - -
Bach6g00900 263 MobiDBLite consensus disorder prediction 1 70 - -
Bach6g00900 263 MobiDBLite consensus disorder prediction 182 224 - -
Bach6g00900 263 CDD AP2 92 150 IPR001471 GO:0003700|GO:0006355
Bach6g00900 263 MobiDBLite consensus disorder prediction 72 93 - -
Bach6g00900 263 FunFam Ethylene-responsive transcription factor 2 90 149 - -
Bach6g00900 263 Pfam AP2 domain 90 141 IPR001471 GO:0003700|GO:0006355
Bach6g00900 263 ProSiteProfiles AP2/ERF domain profile. 91 148 IPR001471 GO:0003700|GO:0006355
Bach6g00900 263 PRINTS Ethylene responsive element binding protein signature 114 130 IPR001471 GO:0003700|GO:0006355
Bach6g00900 263 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00900 Bach-Chr6 7061665 7062456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00900 79 259 AP2-EREBP Transcription Factor Family AT2G44940 57.282 8.60e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach6g00900 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00900 - - gmx:100801129 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00900 6 7061665 7062456 Bach6g00900 6 7061665 7062456 ECH