Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00899 GGGCACTCTGTAGAAGGTTTCTGGGAAATTTTTTGTTGTTTTATAATGTGAGTGGAACTGTCTTATGTGTGTCTAGGGTTTGGAGGTGTGTGTGGTTTCAATGGGGAGTATGTCTGAGCCAGACAGAAAACGGCGTCACTTTAGCTCCTTGTCTCCTACTGCTGCAGCCGCTACTGATAAGAAGCTACCCTTCTTGCCCATTTCTGAAGACAAAAAGCTTGATATTGCCGTGCTTCAGTTTCAGAATCAAAAGCTTACACAGAAATTAGAAACTCAGAAGGTAGAACATACTGCTCTTGAGAATAAATTTTCTCAACTGAAGGAGAAGCAACAGTTGTATGATTCCACATCAACATTGGCCAAGAAGTCTTGGGAACAGCTGGTCAATGATTTGGAGTTATGTTCTATTGGCACAAGAGAGTCTAGCAGCAAATTGGATTTGAAATCAGTCATGGGAGTTGGTAGTCCATCTACTGTTGAGGATGTTTTTCTTAGCCGACTTTTGCAAACTGGTGCAACTGAAAGTTCCTCAATATTTAATTGTGCTGATCAGATGGGAGACCATAGAGAAACTACTACTGAAAAAGCTCAGAGCATTTTAAATAATATAGTGACAGCTATCAACAATCTTTGGCTTGTGAAGGATGGCTTGCATGCTACAGTACTAGAAAAACTTCCAGATGATGGTTCATGCAGGCAGGAGTCCTCCATTGGTTTGCTGACAGAAGTTAAAAACTTGAGATCTACGTTTGGTGAACTTCATTTGAAGCACAAGTCTTTGATGAGTGAGTTTCAAAGTCATCGAGATCTTGATGACAAAAACAAATTGGAGATTAAAAGATTAAAAGGGGAATTGGAAAACACCGTAACAGAATTAGAAGAAAGTAACCGCATGCTGGCAACTCTTAAGGTGGAGAGAGATGCAGTGAAAGGGGGAGTTTTCCCAATCTTAAATGTGGGAAATAAGCATGTTTCTAGCGATAAGATTATAGACAAGCAAAAGGATTTGCTAGACTTGGAGTCTTCCCTGAAAGAGCTATTGGACCAAGGTATGTCTCGACTAGGAGAGCTGAAAAGACTTCATGAGGAAAGAATAAGAATATTACAGCAGTTATGTGATTTACAGAACACTCTGAAGAATTTGAAATGTATTGCCTCTTCTGATTCATTCAAATTGGCGAGAGATCAAATAGAGAAGTCAAAATCAGAATTTCTCAAGTATCAGGCCTTATATGAGAAACTACAGGTCGAGAAGGACAATCTTTTATGGAAGGAGAGAGATTTGTACATGCAAAGTGATTTAGTAGATGTTGTTCAAAGATCTGCAGCAATTGCTGATTCTAGAATGGCTGAGTTAGGGATTAAAATTCAGAAAAAAATTGAGGAAAGAAATGAGATTGAAAAGAGGTTGGAAGAGGCAGCAAGAGAGCCAGGACGGAAACAAGTCATTGCAGAATTTAAATCCCTGGTGTCTTCATTTCCTGAGGAAATGGGATCTATGCAAAATCAGTTAAGTAAGTTCAAAGAGGCAGCTTCAGATATCCATTCTCTGCGTGCAGATGTGCAGTCTCTTTCTACTATTCTTGATAGAAAGGTAAAAGAATGTGACATGTCAGCTGTTAGATCTGCTGATCAAGTTGCTGAGATACAAAGGCTGAATGCTGTGGTCCAAGATTTGAGAGAAAGTGAGGAAGAGTTGAAGTTAATTTTGGAAATGTATAGACGAGAGTCCATTGATTCAAGGGATGTTGCTGAAGCACGGGATTCAGAATACAGAGCATGGGCACGTGTTCAAAGTTTGAAATCTTCCCTTGATGAGCACAATTTGGAACTTCGAGTTAAAACAGCAAATGAAGCAGAGGCCAGATCTCAACAGAGGCTGGCTGCTGCTGAAGCTGAGATAGCTGACCTGAGACAGAAATTAGAAGCTTCTAAAAGGAAGAAGTCTAAATTGTCTGATGTCTTAAAATCAAAAAATGAAGCTAATGAGGCCTATCTATCTGAAATAGAGACTATTGGACAAGCATATGATGATATGCAGAATCAGAACCAACAATTGTTGCAGCAGATTACTGAGAGAGATGACTACAATATCAAGCTTGTCTTAGAGGGTGTTAGGGCGAGACAGGTGCAGGATTCACTGCTCATGGAGAAGCAGGTCTTAGAACGAGAGATCCATCAACAAAATGCATCTCTAAATTTTTATGATATGAAAGCTGCAAGACTTGAAGACCAGGTGAAATTCTGTTCAGATCAGGTTCAGAGAATTGCTGAGGATAAGTTTCATGGTTCTGTCACTTTGGAAAATACACAAAAAAGGTTGCTGGATGTCCGAAAGGCATCTGAACAAGCCAGAGAGACACTGGAGGAAGTACAATCTAAAGTTGGTAGTAGTCGAGTAACTCGCATGGAGTTACAAGTAGAACTTGAGAAAGAAAGGTTTGCTAAGAAACGAATAGAGGAGCAGCTGGAGGTTGACAGGAGAAAGGTTGCATCTATTCGGGCAAAAACTGAGGGCTCCTCAGTTACTCAAAAGCTTCGCCAGGAACTGGGAGAATACAGGGAAATTGTTAAGTGCAGTATCTGTCAGGACAGAGCGAAAGAGGTGGTAATTACAAAATGCTACCATTTGTTTTGCTACCCTTGCATCCAGAAAGTTATGGAGAATAGGCACCGCAAGTGTCCACAGTGTTCTGCAAGCTTTGGGCCTAATGATGTTAAGCCTGTTTATCTGTAACTGGAAATTCAATTCTTTACTTCTGCACCCAGAGTGTCCATTTAACGCATGGATACTCCCCAGGTTGAGGTGTTTTCTTATGTTAGCAGTGGTAGAGATATAGAACACTAGCTGGGTTGAGTGAGTTTCCTTCCCCCTTCCCTGGCTGGGACTAATGCTGGTCATTTTTGCTGGTGCTTGTTCTTATTATCGATTGTACCTTTCTTGAGTTTTCAATCTTCGATGTTATTAGTTTTCAGTTTCAAGTTCTTTTAGGAAAAAGAATCCCTTCGAACCATAGGAACTTTGATACTTGTTCTTTGCAGATTTATCATAATACATCCAATCTGTTTCGTAGAGAGGTCATAGAGATTGTTGGGTTTTGACTGGAATTTTAATAAATCAAATGATTATAAGCCCTGAAAGGCACCGTGGCA 3153 0.4015 MGSMSEPDRKRRHFSSLSPTAAAATDKKLPFLPISEDKKLDIAVLQFQNQKLTQKLETQKVEHTALENKFSQLKEKQQLYDSTSTLAKKSWEQLVNDLELCSIGTRESSSKLDLKSVMGVGSPSTVEDVFLSRLLQTGATESSSIFNCADQMGDHRETTTEKAQSILNNIVTAINNLWLVKDGLHATVLEKLPDDGSCRQESSIGLLTEVKNLRSTFGELHLKHKSLMSEFQSHRDLDDKNKLEIKRLKGELENTVTELEESNRMLATLKVERDAVKGGVFPILNVGNKHVSSDKIIDKQKDLLDLESSLKELLDQGMSRLGELKRLHEERIRILQQLCDLQNTLKNLKCIASSDSFKLARDQIEKSKSEFLKYQALYEKLQVEKDNLLWKERDLYMQSDLVDVVQRSAAIADSRMAELGIKIQKKIEERNEIEKRLEEAAREPGRKQVIAEFKSLVSSFPEEMGSMQNQLSKFKEAASDIHSLRADVQSLSTILDRKVKECDMSAVRSADQVAEIQRLNAVVQDLRESEEELKLILEMYRRESIDSRDVAEARDSEYRAWARVQSLKSSLDEHNLELRVKTANEAEARSQQRLAAAEAEIADLRQKLEASKRKKSKLSDVLKSKNEANEAYLSEIETIGQAYDDMQNQNQQLLQQITERDDYNIKLVLEGVRARQVQDSLLMEKQVLEREIHQQNASLNFYDMKAARLEDQVKFCSDQVQRIAEDKFHGSVTLENTQKRLLDVRKASEQARETLEEVQSKVGSSRVTRMELQVELEKERFAKKRIEEQLEVDRRKVASIRAKTEGSSVTQKLRQELGEYREIVKCSICQDRAKEVVITKCYHLFCYPCIQKVMENRHRKCPQCSASFGPNDVKPVYL 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00899 878 Coils Coil 636 656 - -
Bach6g00899 878 Coils Coil 242 272 - -
Bach6g00899 878 MobiDBLite consensus disorder prediction 1 15 - -
Bach6g00899 878 CDD RING-HC_Bre1-like 819 876 - -
Bach6g00899 878 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 807 878 IPR013083 -
Bach6g00899 878 Coils Coil 734 761 - -
Bach6g00899 878 MobiDBLite consensus disorder prediction 1 21 - -
Bach6g00899 878 Coils Coil 580 621 - -
Bach6g00899 878 Coils Coil 296 316 - -
Bach6g00899 878 Coils Coil 416 443 - -
Bach6g00899 878 SMART ring_2 826 864 IPR001841 -
Bach6g00899 878 Pfam Zinc finger, C3HC4 type (RING finger) 826 864 IPR018957 GO:0046872
Bach6g00899 878 Coils Coil 706 726 - -
Bach6g00899 878 Coils Coil 42 76 - -
Bach6g00899 878 Coils Coil 516 543 - -
Bach6g00899 878 ProSiteProfiles Zinc finger RING-type profile. 826 865 IPR001841 -
Bach6g00899 878 ProSitePatterns Zinc finger RING-type signature. 841 850 IPR017907 -
Bach6g00899 878 FunFam E3 ubiquitin protein ligase 807 878 - -
Bach6g00899 878 Coils Coil 769 803 - -
Bach6g00899 878 Coils Coil 364 384 - -
Bach6g00899 878 PANTHER RING FINGER PROTEIN-RELATED 1 878 IPR013956 GO:0004842|GO:0010390
Bach6g00899 878 SUPERFAMILY RING/U-box 818 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00899 Bach-Chr6 7046502 7055624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00899 818 877 C3H Transcription Factor Family AT3G58030 34.426 2.53e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00899 K10696 - gmx:100790744 1191.79