Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00896 ATGAGTAGTATGAACTACGAGCAGAGGCTCCAAGTTGCAGCCAAGTTCATACTCGACTACGATGCACGCGCCGACGAAACGGCGGTGAACTGGGAAGAGCTTGGGTTGAGAGCGACTCTCAAACCGCACCAAATGGACGGAGTTTCATGGCTAATAAGGCGATATAAACTTGGCGTCAACGTTGTACTTGGGGATGAGGTAAATTTTCTTCAATTTCTTTACCAGAGCCTAATTAGTGATCTCAAAGGGAAAACTTGGTATCTGATGGGATTGGGCAAGACTTTGCAAGCTATATCCTTCTTGAGCTACTTAAAAGTGTCCAAGTTGACACTTGGACCATTTTTGGTTTTATGTCCTCTAAGTGTAACAGATGTTTGGGTGTCTGAGATAGTGAAATTTGCCCCCAACCTGAAAGTTTTCAAATATGTTGGTGACAAAGAACACCGGTGCACTCATCGCAGGAAGTTACATGAGCATGTAAAAGGACCGTCATCAGCACTGAATGTCTCGTTGCCTTTTGATGTCTTGTTGACAACATATGACATTGCACTGGTGGATCAGTATTTTCTTTCTCAAATACCATGGCGTTTTGCAATTGTTGATGAAGCTCAAAGACTTAAAAATCCTTCAAGTGTTTTATATAATACCCTCAAAGATCGCTATATCATGCCAAGAAGATTGTTGATGACTGGCACACCTATTCAAAACAACCTTTCTGAGCTGTGGGCGTTGATGCATTTTTGCATGCCCTCTGTTTTTGGTACACTGGATCAATTCCTCTCCACGTTCAAAGACATCAGTAGTCCTACATCAGCCAATGATGCATCAAATGTAAAGGTGCGGCTGAAAACTCTGAAAAGTATATTGGGAGCTTTTATGCTTCGACGAACCAAATCAAAGCTTATTGAATGTGGAAATCTAGTGCTGCCACCTCTTACTGAGATTACTGTGATGGCACCCCTTGTCAGCTTGCAAAAAAAAGTCTACATGTCAATATTGAGGAAGGAACTTCCTAAACTGCTTGCACTATCTTCTGGTGCTTCAAATCATCAGTCACTGCAGAATATTGTGATACAGCTTAGAAAAGCATGCAGCCATCCTTATCTCTTTCCTGGAATCGAGCCTGAACCTTATGAAGAGGGTGAACATCTGGTTCAGGCAAGTGGTAAACTGTTGATTCTGGACCAAATTCTTCAGAAGCTACACTATTTAGGTCACCGTGTCCTTCTTTTTGCTCAGATGACCCATACACTTGATATTTTGCAGGATTACCTGGAGTTACGAAATTATTCATATGAGCGTCTTGATGGGTCAATTAGGGCTGAGGAGCGCTTTGCTGCAATAAGAAGTTTCAGCTGCTCATCAGCCAATGTGGGTTTGAATTCAAGGCCAGACCAAAGTGGTGCTTTTGTTTTTATGATCTCAACGAGAGCAGGGGGTGTTGGCTTGAATCTTGTCGCTGCTGATACTGTTATATTCTATGAGCAAGATTGGAACCCTCAAGTGGACAAACAAGCTTTGCAGCGAGCTCATAGGATTGGCCAAATGAATCACGTATTGTGCATAAACATTGTTTCAGAACGTACTGTGGAGGAGGTAATTATGCGGAGAGCAGAGAAAAAATTGTTGCTTAGCCTCAATGTTATGGGTGATAATATTTTGGAGCATGAAGATGAAGAAACATCCAGAGCCGTAACTAGTGATTTGAAATCTGTTATATTTGGGTTACATATGTTTGATCCCACTGAGATTAATGATGGAAAATCAGGAAACTTAGATTTGTCTGAAGTTAATGCTATGGCAGACAAGGTGATTGGAGTTCGTGATGAACAGACATCTGACAAGGATGACAGGAAATTTGAGGTCAACCCAAGGAATATTCTGAAAGGATATGATGCTATGGAAGGACATTCTGCTTCTCAGTATGATCCTGGCCTTGATGAGGCTTCGTATTTCTCCTGGGTTAAAAAATTTGAAGAAGTGTCAAAAGCAAGCAGTGACTCTGTTATGCAGTTGAGGAACAGGAGGAGCACAGATCAGGAGGAAAAGTGTCGGAAATTTGACGAAACAAAGAAGAAGGCAGAGGAAAAGAAGCTGTCAAAGTGGGAAGCTCTTGGATACCATTCATTGAATGTGAAAAGCCCTACCAGCCCACCAGCTGATGTTATGTCAGATACTGGGTCTGTGCATTTCGTTTATGGAGATTGTACAGATCCATCAAAAACTTGTCCATCTGAACCAGCCATAATATTCAGCTGTGTTGATACCTCTGGGCACTGGGGCCGGGGAGGAATGTTCGATGCATTAACCAAACTTTCTACAAGCATTCGTGATGCATATGAACAGGCTTCTGAACATGATGACCTGCATCTTGGTGATCTCCATCTTATAAGGCTTAAAGATGACTCTGATGAACAAAGCATGAATGGAAAAACGCCCCTGTGGGTCGCTTTAGCTGTGGTTCAGTCTTATAATCCAAGGCGTAAAATCCCTCGCAGTAAGATCTCACTACTTCACTTGGAAAACTGCTTATCAAAGGCAGCATTCTCGGCCTCTCAAAATTCTGCATCAATCCACATGCCACGCATTGGTTATCAAGAGGGATCAGATCGTTCTGAGTGGTACACCATAGAACGTCTTCTACGAAAATATGCCTCCATTTATGGCATAAAGATTTTCGTGTATTACTATCGACCATCACGTTAA 2706 0.4217 MSSMNYEQRLQVAAKFILDYDARADETAVNWEELGLRATLKPHQMDGVSWLIRRYKLGVNVVLGDEVNFLQFLYQSLISDLKGKTWYLMGLGKTLQAISFLSYLKVSKLTLGPFLVLCPLSVTDVWVSEIVKFAPNLKVFKYVGDKEHRCTHRRKLHEHVKGPSSALNVSLPFDVLLTTYDIALVDQYFLSQIPWRFAIVDEAQRLKNPSSVLYNTLKDRYIMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLDQFLSTFKDISSPTSANDASNVKVRLKTLKSILGAFMLRRTKSKLIECGNLVLPPLTEITVMAPLVSLQKKVYMSILRKELPKLLALSSGASNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLLILDQILQKLHYLGHRVLLFAQMTHTLDILQDYLELRNYSYERLDGSIRAEERFAAIRSFSCSSANVGLNSRPDQSGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINIVSERTVEEVIMRRAEKKLLLSLNVMGDNILEHEDEETSRAVTSDLKSVIFGLHMFDPTEINDGKSGNLDLSEVNAMADKVIGVRDEQTSDKDDRKFEVNPRNILKGYDAMEGHSASQYDPGLDEASYFSWVKKFEEVSKASSDSVMQLRNRRSTDQEEKCRKFDETKKKAEEKKLSKWEALGYHSLNVKSPTSPPADVMSDTGSVHFVYGDCTDPSKTCPSEPAIIFSCVDTSGHWGRGGMFDALTKLSTSIRDAYEQASEHDDLHLGDLHLIRLKDDSDEQSMNGKTPLWVALAVVQSYNPRRKIPRSKISLLHLENCLSKAAFSASQNSASIHMPRIGYQEGSDRSEWYTIERLLRKYASIYGIKIFVYYYRPSR 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00896 901 CDD Macro_Poa1p-like_SNF2 728 888 - -
Bach6g00896 901 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 393 566 IPR001650 -
Bach6g00896 901 SUPERFAMILY Macro domain-like 729 896 IPR043472 -
Bach6g00896 901 Pfam SNF2-related domain 88 369 IPR000330 GO:0005524|GO:0140658
Bach6g00896 901 Coils Coil 677 697 - -
Bach6g00896 901 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 89 251 IPR014001 -
Bach6g00896 901 SMART ultradead3 36 259 IPR014001 -
Bach6g00896 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 296 IPR027417 -
Bach6g00896 901 Gene3D - 307 618 IPR027417 -
Bach6g00896 901 SMART helicmild6 419 514 IPR001650 -
Bach6g00896 901 Gene3D - 16 306 IPR038718 -
Bach6g00896 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 560 IPR027417 -
Bach6g00896 901 Gene3D Leucine Aminopeptidase, subunit E, domain 1 728 900 IPR043472 -
Bach6g00896 901 CDD SF2_C_SNF 382 525 - -
Bach6g00896 901 FunFam Putative helicase CHR10 307 619 - -
Bach6g00896 901 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE 21 679 IPR031053 GO:0003678|GO:0006281|GO:0006338
Bach6g00896 901 Pfam Helicase conserved C-terminal domain 390 514 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00896 Bach-Chr6 7021130 7030664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00896 89 552 RAD5 or RAD16-like Gene Family AT1G02670 27.256 1.58e-27 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach6g00896 SNF2_N 2.1e-45 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00896 K20092 - gmx:100797182 1296.18