Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00889 ATGTTGGACTATGAATGGGGGAATCCATCCACCATAATGCTCACCGGAAACGAAGAAGCAGCCGCTGCCGCCGCAGCAGTGGCTCAAGACTCCGACCAAAGCCATCGGCAATTCTTCGAACACTATCCTTCCCACGCCTTATTACCTGACCACCTGCTTTCTAACCCACAACATGGCTCCACACCCAACAGCGCCACCGCAGATTTCTCTCACCAACACCAACACCACCACTTTAACCCCCAATACCACCATCATCATAATATTCACCACCCGTTCTTCGACCCACGCGCCTTCCCCGGCGTGTCGACGCACTTCCCCGCTACTGCATCTGCTCCACCTTCTGTTCTCTCTCTTGACCCGCTCCCGACCGTCAACGCCAACTGTGGGCCTGGGCTTTTGGTCGTTCCGAAATCCGAGGATGTCGGTCGGCCCATGGACTTCTCTGCATCCAGAATTGGGTTGAACTTGGGTGGCCGTACATATTTCTCCTCCGAGGATGACTTCGTGAGCCGACTCTATCGGCGGTCTAGACCGGCTGATCCGGGAACAACGTCGTCTAACTCCCCCAGGTGCCAAGCCGAGGGATGCAATGCCGATCTCTCCCATGCCAAGCACTACCACCGTCGCCACAAGGTTTGCGAGTTTCACTCCAAAGCAGCCACCGTCATCGCCGCCGGTTTAACTCAGCGGTTCTGCCAGCAGTGTAGCAGGTCGTTCCATCTTCTTTCGGAGTTTGATAATGGGAAACGTAGCTGCAGGAAGAGGCTAGCTGATCACAATCGTCGCCGGCGAAAAACCCAGCAGCCAAGTCAAGAAATTCAGAAACCCAATATTGAAAATGCCCGAAATCCTAATCTGGAAAATGTGGCAAGGTCCCCGCCGGACTCGGGAGCTCCGTCATCATCGGTGACCGTGGCGGTCTCACCACCGGATTATTTCCGGCAAAGGCCATATCAAAGTACAAGCTCTTCAACAACATCAAGCTCACTGTTTTTCTGTAGTGGGTAG 1008 0.5437 MLDYEWGNPSTIMLTGNEEAAAAAAAVAQDSDQSHRQFFEHYPSHALLPDHLLSNPQHGSTPNSATADFSHQHQHHHFNPQYHHHHNIHHPFFDPRAFPGVSTHFPATASAPPSVLSLDPLPTVNANCGPGLLVVPKSEDVGRPMDFSASRIGLNLGGRTYFSSEDDFVSRLYRRSRPADPGTTSSNSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRSFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPSQEIQKPNIENARNPNLENVARSPPDSGAPSSSVTVAVSPPDYFRQRPYQSTSSSTTSSSLFFCSG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00889 335 Pfam SBP domain 191 265 IPR004333 GO:0003677
Bach6g00889 335 SUPERFAMILY SBT domain 189 269 IPR036893 GO:0003677|GO:0005634
Bach6g00889 335 FunFam Squamosa promoter-binding-like protein 14 182 253 - -
Bach6g00889 335 Gene3D - 182 253 IPR036893 GO:0003677|GO:0005634
Bach6g00889 335 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 69 325 IPR044817 GO:0003677
Bach6g00889 335 MobiDBLite consensus disorder prediction 270 335 - -
Bach6g00889 335 ProSiteProfiles Zinc finger SBP-type profile. 188 266 IPR004333 GO:0003677
Bach6g00889 335 MobiDBLite consensus disorder prediction 257 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00889 Bach-Chr6 6961461 6963371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00889 1 237 SBP-box Gene Family AT1G02065 45.635 2.71e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach6g00889 SBP 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00889 - - gmx:100778566 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00889 6 6961461 6963371 Bach6g00889 6 6961461 6963371 ECH