Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00888 ATGGATTTTGGAGGGAACATGTTCTGTCTTAGCAACGGTAATAGAGAACAAAATGGTAACAGTAACAACCTTAATTTTGCTTGGGATTCATGGGAACCAACTACTTCGGTTAATTCAAGGCTCATTAATGCGTTTTACACGACCAACGCTGCGGTGGCGGAGACCACCGGCGCCGCCACTCGCCAGGAGGCAAGTCTAGCAAATGCACTCATGTTCCTTCCTCAAGCTAATCATCATGACGACGGTGCTCAACACCAACAGCAGCAGCAGCAGGCACTGTACTCCGCCGCAGATGGGTCCCACGTGCACCCAGACCCACATCTCACTTGCTTGAAGCTTGGGAAGAGGCACTATTTTGAGGACGCTAATGCCCCCCATTTGGGCAGTGGTGGTGGGGGTGGAATTAGTGGGTTCTCTTTGGCGGGAAAGAGAGGGAAAGCTTATAATGGAAGTGGTGGTGGCGGCAGCGGTGTCAAAGCGGCGTCGTTTGCCACCGCGGCTGTACCGAGATGTCAGGTGGAGGGATGCCACGTGGCACTGTTGAACGCGAAGGACTACCACCGGAGGCACAAGGTGTGTGAGATGCATTCCAAGGCACCCAAAGTTGTGGTGTTAGGGTTGGAGCAGAGGTTCTGCCAGCAGTGTAGCAGGTTCCATGTGGTTTCAGAATTCGATGATTCAAAGAGGAGTTGTAGGAGGAGACTGGCAGGCCACAATAAGCGAAGAAGAAAGAGCTCCCTTGATTCTGTTGCTAGGAATCCTTCTCAAGACAATAAGTTGATGGTTGGAGGATTTCCATACTTATCATCAGCAGCAGCAGCAGCAGGGTGTGCTCGCTCTCTTCTGTCATCGAAGAATGATTCTTGGCTCTCTCCTGCTGATCTATCCTCAAGATGCAGTGCTGCACTTCGCGAACTGATAGCAGAAAACCGCGCAGCCATCATGTCTCGGCAGCTCATCTCAGATAGAGACTGGCATTCGCATCACAGTGCAGTGGAAGACCTTAAGGAGATCCAGCATGAGTACAATTATTTTCCCCAACAGCAGCACATGTTTCCCTAG 1062 0.5122 MDFGGNMFCLSNGNREQNGNSNNLNFAWDSWEPTTSVNSRLINAFYTTNAAVAETTGAATRQEASLANALMFLPQANHHDDGAQHQQQQQQALYSAADGSHVHPDPHLTCLKLGKRHYFEDANAPHLGSGGGGGISGFSLAGKRGKAYNGSGGGGSGVKAASFATAAVPRCQVEGCHVALLNAKDYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNKRRRKSSLDSVARNPSQDNKLMVGGFPYLSSAAAAAGCARSLLSSKNDSWLSPADLSSRCSAALRELIAENRAAIMSRQLISDRDWHSHHSAVEDLKEIQHEYNYFPQQQHMFP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00888 353 MobiDBLite consensus disorder prediction 79 100 - -
Bach6g00888 353 FunFam Squamosa promoter-binding-like protein 14 162 232 - -
Bach6g00888 353 Gene3D - 162 232 IPR036893 GO:0003677|GO:0005634
Bach6g00888 353 ProSiteProfiles Zinc finger SBP-type profile. 168 245 IPR004333 GO:0003677
Bach6g00888 353 Pfam SBP domain 171 244 IPR004333 GO:0003677
Bach6g00888 353 MobiDBLite consensus disorder prediction 80 96 - -
Bach6g00888 353 SUPERFAMILY SBT domain 169 250 IPR036893 GO:0003677|GO:0005634
Bach6g00888 353 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 75 280 IPR044817 GO:0003677
Bach6g00888 353 MobiDBLite consensus disorder prediction 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00888 Bach-Chr6 6950125 6952296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00888 110 244 SBP-box Gene Family AT1G27370 51.449 7.73e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach6g00888 SBP 2.1e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00888 6 6950125 6952296 Bach6g00888 6 6950125 6952296 ECH