Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00878 AACAATATTACTTATACTATAACCTCCATCATTTGCTCTCTGTCTTCCACTACAATCTAATATTCTCCTCTTCAGCTTTAGCCTTAGCTTATGAACAAAGAATTCAGAGTGTGTAATATACCGTCTTCTTCTCCCAAATGAGTCAGTGTGTTGTTCCAAGTTGGGATGTGGATGACAATCCCACTGCCCCAAGAGTCTCTCTTCGCTCTCACTCCAATTCCACTACCCCTGATGTCCCTATGTTAGATTATGAAGTTGCAGAGCTAACATGGGAGAATGGGCAAATATCCATGCATGGTTTGGGTTTCCCACGAGTTCCGGCGAAACCCAATACAGTGGCTGCCGCCACAAACACGAGATCAGCTGTCTCTACCTCCCCTTCCAAATACACATGGGAGAAGCCACGTGCTGGTGGCACCTTGGAGTCCATAGTCAACCAAGCTACTGGCTTGCCTAGTCTCAGCAAAACCATGTTTGGCGGTGTTGGTGGCGGCGGCGGCGATGGAGATGACCAAGTGCCCTGGTTTGACCACCATCGAGGTGCTGCGGTGGCTTCCACGGCGGCAGCATCAAACACAATGACTATGGACGCCTTGGTGCCCTCCTCAAACCGTACGGACGACCAGAGCACACGCTCTTTGCCTGGTATTGGCACGCGCATGGTTGGGTCATCCACACGTGTGGGGTCTTGCAGTGGGTGTGCCGCCACCCATGACGAAGATGCGGCTCTCCAAGCAGAGAAACGCACCAGGGCGGAGCGTGTGCCAATAACGCACGAGTGGAGCAGCTGGGATCAGAATCATAGTATGAGTGGTAGTGCTACTTTTGGGAGGGACAGCCAGCAAATAACTCTTGACTCGTCTGACATCGAAATTGGTGCGGGGTTCACTTCTACTTCAAATGGTTCGCCAGAAAACACCAACTCCGCCAAGCAGAGCACGAAGACCATCACCACCACCGCCGACGACCACGATTTTGTTTGCCACAGTAGATCACAGGCAAAGGACGGTGACGAGGAGAACAAAAAGAAAGGAACCAGGAAATCCTCTGTGTCCACTAAAAGGATTAGAGCTGCCGCTATACACAATCAATCCGAAAGGAAAAGGAGGGATAAGATTAACCAGAGGATGAAAACACTGCAGAAGCTGGTCCCAAATTCCAGCAAGACTGATAAAGCGTCAATGCTAGATGAGGTGATTGAATACCTCAAGCAGCTGCAGGCACAAGTGCAAATGATGAGTAGAATGAACTTGTCTCCAATGATGATGCCAATGACTATGCCACAGCAGCTTCAAATGTCTATGATGGCTCCAATGGGCATGGGTTTGGGTATGGGCATGGGCATGAGTATAGGCATGGACATGAACACCATGGGCCGCCCTAATATACCCGGCATGCCTCCCGTCCTTCACCCTTCTGCCTTCATGCCGATGGCTTCGTGGGACGCCTCCGGTGCTGCCGCTGAGCGGCTGCAAGGGACACCGGCGGCAGTGATGCCTGACCCCTTATCCACATTTCTAGCATGCCAATCACAGCCCATGACAATGGATGCATACAGTAGGCTGGCTGTCATGTATCAGCAGCTGCATCAACCTCCAGCTTTTAGTTCCAAGGGCTAA 1619 0.5114 MSQCVVPSWDVDDNPTAPRVSLRSHSNSTTPDVPMLDYEVAELTWENGQISMHGLGFPRVPAKPNTVAAATNTRSAVSTSPSKYTWEKPRAGGTLESIVNQATGLPSLSKTMFGGVGGGGGDGDDQVPWFDHHRGAAVASTAAASNTMTMDALVPSSNRTDDQSTRSLPGIGTRMVGSSTRVGSCSGCAATHDEDAALQAEKRTRAERVPITHEWSSWDQNHSMSGSATFGRDSQQITLDSSDIEIGAGFTSTSNGSPENTNSAKQSTKTITTTADDHDFVCHSRSQAKDGDEENKKKGTRKSSVSTKRIRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSRMNLSPMMMPMTMPQQLQMSMMAPMGMGLGMGMGMSIGMDMNTMGRPNIPGMPPVLHPSAFMPMASWDASGAAAERLQGTPAAVMPDPLSTFLACQSQPMTMDAYSRLAVMYQQLHQPPAFSSKG 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00878 493 CDD bHLH_AtPIF_like 311 371 IPR047265 -
Bach6g00878 493 MobiDBLite consensus disorder prediction 246 309 - -
Bach6g00878 493 MobiDBLite consensus disorder prediction 276 301 - -
Bach6g00878 493 MobiDBLite consensus disorder prediction 154 175 - -
Bach6g00878 493 MobiDBLite consensus disorder prediction 246 275 - -
Bach6g00878 493 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 40 490 IPR031066 -
Bach6g00878 493 MobiDBLite consensus disorder prediction 214 231 - -
Bach6g00878 493 SMART finulus 317 366 IPR011598 GO:0046983
Bach6g00878 493 Pfam Helix-loop-helix DNA-binding domain 316 361 IPR011598 GO:0046983
Bach6g00878 493 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 311 360 IPR011598 GO:0046983
Bach6g00878 493 FunFam transcription factor UNE10 isoform X1 306 371 - -
Bach6g00878 493 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 315 384 IPR036638 GO:0046983
Bach6g00878 493 MobiDBLite consensus disorder prediction 201 231 - -
Bach6g00878 493 Coils Coil 317 337 - -
Bach6g00878 493 Gene3D - 306 371 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00878 Bach-Chr6 6747362 6750924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00878 1 474 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 48.447 3.07e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach6g00878 HLH 7.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00878 - - dzi:111313267 544.273