Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00876 ATGGCTCTTACTCTCCAAAATGCTTTCTTTCATTTACTCCCTCTTGTAGCTTTCTTTTCAATATTTCTAGTGACTCCATCCTCTTGCTCCAACCCCAGAAAGCTTCTTAATTCTTCATACTCCCCATCTGATTCAGATTGGTCGCCAGCGGAGGCCACTTGGTATGGAAGCCCTAATGGCGCCGGAAGTGATGGGGGTGCTTGTGGATATGGCAATGCTGTTGAGCAGCCCCCATTCTCTTCAATGATATCAGCTGGAGGTCCTTCATTGTATGAGTCAGGCAAAGGATGTGGTGCTTGTTATGAGGTGAAGTGTACCGGGAACTCGGCATGCTCCGGCAACCCTGTGCATGTGGTCATCACTGACGAGTGTCCTGGTTGTGGTTCAGCAGACAAAGTTCATTTTGATTTGAGTGGCACTGCCTTTGGTGCCATGGCAGTTTCAGGTCAGGCAGAGCAGCTACGCAATGCTGGGAAATTGGACATTCAACATAGAAGGGTTGAATGCAACTACCCTGGTATGTCAATTGCTTTTCATGTGGACGCTGGCTCAAACCCTAACTATTTTGCTTCCCTAATTGAATATGAGGATGGAGATGGTGACCTTGCCAAGGTTGAGCTCAAACAAGCCCTTGACTCGGACTCATGGCTTTCCATGCAAGAATCCTGGGGTGCAGTCTGGAAACTTGACTCAGGATCACCACTGAAAGCTCCATTCTCCCTCCGGCTAACGACACTCGATTCCGGCAAGAGTATTGTCGCCAACAATGTGATTCCGGCTGGGTGGACACCGGGCCAGACTTACCGTTCGGTTGTGAATTTTCAAACCTAGCTAAGGTGTGAATTCAGCTTGAAGATAATCATGAGTCATTGTATTTGTGGACTTTGA 888 0.4797 MALTLQNAFFHLLPLVAFFSIFLVTPSSCSNPRKLLNSSYSPSDSDWSPAEATWYGSPNGAGSDGGACGYGNAVEQPPFSSMISAGGPSLYESGKGCGACYEVKCTGNSACSGNPVHVVITDECPGCGSADKVHFDLSGTAFGAMAVSGQAEQLRNAGKLDIQHRRVECNYPGMSIAFHVDAGSNPNYFASLIEYEDGDGDLAKVELKQALDSDSWLSMQESWGAVWKLDSGSPLKAPFSLRLTTLDSGKSIVANNVIPAGWTPGQTYRSVVNFQT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00876 276 CDD DPBB_EXPB_N 47 169 - -
Bach6g00876 276 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 65 174 IPR007112 -
Bach6g00876 276 PANTHER EXPANSIN-B3 23 274 - -
Bach6g00876 276 PRINTS Major pollen allergen Lol pI signature 146 161 IPR005795 GO:0005576|GO:0019953
Bach6g00876 276 PRINTS Major pollen allergen Lol pI signature 105 115 IPR005795 GO:0005576|GO:0019953
Bach6g00876 276 PRINTS Major pollen allergen Lol pI signature 178 193 IPR005795 GO:0005576|GO:0019953
Bach6g00876 276 PRINTS Major pollen allergen Lol pI signature 85 96 IPR005795 GO:0005576|GO:0019953
Bach6g00876 276 PRINTS Major pollen allergen Lol pI signature 225 242 IPR005795 GO:0005576|GO:0019953
Bach6g00876 276 PRINTS Major pollen allergen Lol pI signature 194 209 IPR005795 GO:0005576|GO:0019953
Bach6g00876 276 Pfam Expansin C-terminal domain 176 259 IPR007117 -
Bach6g00876 276 SMART dpbb_1 83 164 IPR007112 -
Bach6g00876 276 Gene3D - 171 275 IPR036749 -
Bach6g00876 276 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Bach6g00876 276 PRINTS Expansin/Lol pI family signature 87 105 IPR007118 GO:0005576
Bach6g00876 276 PRINTS Expansin/Lol pI family signature 157 173 IPR007118 GO:0005576
Bach6g00876 276 PRINTS Expansin/Lol pI family signature 216 230 IPR007118 GO:0005576
Bach6g00876 276 PRINTS Expansin/Lol pI family signature 256 270 IPR007118 GO:0005576
Bach6g00876 276 PRINTS Expansin/Lol pI family signature 46 61 IPR007118 GO:0005576
Bach6g00876 276 SUPERFAMILY PHL pollen allergen 176 270 IPR036749 -
Bach6g00876 276 SUPERFAMILY Barwin-like endoglucanases 39 173 IPR036908 -
Bach6g00876 276 Gene3D - 34 170 IPR036908 -
Bach6g00876 276 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 187 270 IPR007117 -
Bach6g00876 276 Pfam Lytic transglycolase 84 162 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00876 Bach-Chr6 6722092 6723453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00876 1 274 Expansin Gene Family AT1G65680 62.409 3.06e-127 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00876 - - pcin:129295689 448.358