Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach6g00873 | ATGGAGAAGCACAAGTGCAAACTCTGCTTCAAGAACTTCTCTAATGGCAGAGCCTTGGGGGGTCACATGAGGTCTCACATGATGAGCCTTCCGGTTCCGCCAAAACCAGAGGAGTCACCACCGCATGTTCAGCTGAGCTTCGAGGCGGAATCAGCTTCGTCTCCGTCGTCGTCTTCATCGGAAGGGGACGATAAGGGTCTCGGGTATGGGCTGAGAGAGAACCCGAAGAGAAGCATTCGCCTCGTAGATCCAGAGTTTTCGTTCGCTGTTGTAGATTCTGGCTCTGTAATTCTTCAAGATGGAGAGAGCGAGACCGAGTCGTCGAAAAACCCAACTCGGAGACGATCCAAACGCGCTTGGAAATCGGGATTTCTAGAGGATCAGTACAGAAATCACCACAACCAAATTCAAGAGAAAGAGACTTTGAAAAAGCTTAAATCTAACAAACCCGTAAAGACAGAGTCGTGGGCAGAGCCTGAACCGGTTAGTTCAATCTCTGAAACCAGCACCGAAGAAGATGTAGCCGTTTGCCTCATGATGCTTTCAAGGGACAAATGGAAGAGACAAGAACAAAACCGAAAACAGAACGAAGAGGAAGAGGAGGAGAAGGAGGAGGAAGAAGAAGAAGAAGACGAGGACGAAGCTGAGAGTGATGAATCAGAGGAGCTGAAATCGTCAAAGACCAGAGTTCGCGGAAGGTATAAATGTGAAACGTGCAAGAAAGTGTTTCGATCTTATCAAGCACTTGGTGGGCACAGAGCAAGCCATAAGAAGATCAAAGTGAATAATAACATGAACAACACAGTGTACGAGCCTGAACTGGAACAAGAAAATGCTGCCACTTCTGTTCCTCCCATGGCGGATAGTAAGAAAATCCATGAATGCCCAGTTTGTTTCAGAGTGTTTTCTTCAGGTCAAGCGCTTGGTGGGCACAAGAGAACCCATGTTACTGGTTCAGCAAATCCACTTCCAACTCCAACCAAGTTCGTAGAATCTCTCATAGATCTTAATCTCCCTGCTCCAATGGATGACGACGACATTAGCCAATTCGAGAACTCTGCAGTTTCAGATGCAGAATTCGTCAACCTCATTAGGCAATCAACAAAACTTTAG | 1113 | 0.4672 | MEKHKCKLCFKNFSNGRALGGHMRSHMMSLPVPPKPEESPPHVQLSFEAESASSPSSSSSEGDDKGLGYGLRENPKRSIRLVDPEFSFAVVDSGSVILQDGESETESSKNPTRRRSKRAWKSGFLEDQYRNHHNQIQEKETLKKLKSNKPVKTESWAEPEPVSSISETSTEEDVAVCLMMLSRDKWKRQEQNRKQNEEEEEEKEEEEEEEDEDEAESDESEELKSSKTRVRGRYKCETCKKVFRSYQALGGHRASHKKIKVNNNMNNTVYEPELEQENAATSVPPMADSKKIHECPVCFRVFSSGQALGGHKRTHVTGSANPLPTPTKFVESLIDLNLPAPMDDDDISQFENSAVSDAEFVNLIRQSTKL | 370 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach6g00873 | 370 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 26 | IPR013087 | - | |
| Bach6g00873 | 370 | Gene3D | Classic Zinc Finger | 231 | 315 | - | - | |
| Bach6g00873 | 370 | MobiDBLite | consensus disorder prediction | 20 | 75 | - | - | |
| Bach6g00873 | 370 | MobiDBLite | consensus disorder prediction | 46 | 63 | - | - | |
| Bach6g00873 | 370 | MobiDBLite | consensus disorder prediction | 199 | 219 | - | - | |
| Bach6g00873 | 370 | Coils | Coil | 183 | 223 | - | - | |
| Bach6g00873 | 370 | MobiDBLite | consensus disorder prediction | 99 | 170 | - | - | |
| Bach6g00873 | 370 | PANTHER | ZINC FINGER PROTEIN ZAT1-RELATED | 1 | 362 | IPR044303 | GO:0006355 | |
| Bach6g00873 | 370 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 234 | 261 | IPR013087 | - | |
| Bach6g00873 | 370 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 29 | IPR036236 | - | |
| Bach6g00873 | 370 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 236 | 256 | IPR013087 | - | |
| Bach6g00873 | 370 | MobiDBLite | consensus disorder prediction | 187 | 227 | - | - | |
| Bach6g00873 | 370 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 4 | 31 | IPR013087 | - | |
| Bach6g00873 | 370 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 295 | 315 | IPR013087 | - | |
| Bach6g00873 | 370 | MobiDBLite | consensus disorder prediction | 106 | 153 | - | - | |
| Bach6g00873 | 370 | SUPERFAMILY | beta-beta-alpha zinc fingers | 233 | 315 | IPR036236 | - | |
| Bach6g00873 | 370 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 293 | 320 | IPR013087 | - | |
| Bach6g00873 | 370 | SMART | c2h2final6 | 293 | 315 | IPR013087 | - | |
| Bach6g00873 | 370 | SMART | c2h2final6 | 4 | 26 | IPR013087 | - | |
| Bach6g00873 | 370 | SMART | c2h2final6 | 234 | 256 | IPR013087 | - | |
| Bach6g00873 | 370 | Pfam | C2H2-type zinc finger | 233 | 258 | - | - | |
| Bach6g00873 | 370 | Pfam | C2H2-type zinc finger | 293 | 315 | - | - | |
| Bach6g00873 | 370 | Pfam | C2H2-type zinc finger | 4 | 27 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach6g00873 | Bach-Chr6 | 6702434 | 6703546 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach6g00873 | 1 | 348 | C2H2 Transcription Factor Family | AT3G60580 | 43.697 | 8.10e-70 | 219 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | C2H2 | Bach6g00873 | zf-C2H2_6 | 8.9e-12 | CL0361 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach6g00873 | - | - | qsa:O6P43_017371 | 441.039 |