Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00853 ATGTCCGCCTCATCCACTTCCTTTTCACCGGACCAGCACCTCTCTCCTTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCAACTTCTGTGACACTGTCCTCGCGGTAAGTGTTCCTTGTACCAGTTTGTTCAAGACTGTCACAGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTGAATATGCGCGGGCTGCTACTTCCAGCTGCCAATCAGCTTCACCTTGGACACACTTTCTTCACTCCTCAAAATCTTCTGGAGGAGATTCGAAATGCACCATCATCAAATATGCTCATGAATCAACTTCCAAACCCGAATGATCATTCAGTTATGCCACTGCGAGGAGGACCTGAGGGTATCCCTAAACCTCCACCTGCTAATAAACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGACGAGATCCAACGTATCAAAGCTGGGAATCCAGATATAAGCCACAGAGAGGCCTTCAGTGCTGCTGCAAAGAATTGGGCCCATTTCCCTAACATCCACTTCGGACTCATGCCTGATCATCAACCCGTGAAGAAAGCCAATGTGCGCCAGGAAGGAGAGGACATGCTTATGAAAGATGGCTTCTTTCCGCCGGCAAATGTAGGTGTCTCTCCCTATTAA 654 0.4924 MSASSTSFSPDQHLSPSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLGHTFFTPQNLLEEIRNAPSSNMLMNQLPNPNDHSVMPLRGGPEGIPKPPPANKPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPNIHFGLMPDHQPVKKANVRQEGEDMLMKDGFFPPANVGVSPY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00853 217 CDD HMG-box_SF 135 171 - -
Bach6g00853 217 FunFam Axial regulator YABBY 126 198 - -
Bach6g00853 217 PANTHER PROTEIN YABBY 6-RELATED 5 193 IPR006780 GO:0007275
Bach6g00853 217 MobiDBLite consensus disorder prediction 114 135 - -
Bach6g00853 217 MobiDBLite consensus disorder prediction 117 131 - -
Bach6g00853 217 Gene3D High mobility group box domain 122 178 IPR036910 -
Bach6g00853 217 Pfam YABBY protein 18 181 IPR006780 GO:0007275
Bach6g00853 217 SUPERFAMILY HMG-box 125 175 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00853 Bach-Chr6 6419436 6421802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00853 29 215 C2C2-YABBY Transcription Factor Family AT4G00180 62.679 1.47e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bach6g00853 YABBY 9.4e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00853 K25796 - gmx:100781267 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00853 6 6419436 6421802 Bach6g00853 6 6419436 6421802 ECH