Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00844 ATGACAGCCACCTCTCCCCTTTCCTCACTCTATATAAAGGCAGGTAGTTTAGGACATAAAAACACATCCATTCAATCAACCTCAAAGCTTAAACCATATCTGAAATCATATTTTCCTCATCTTCATTCACAAGCCATAGAAAAAGCTACCATAGCATTTCGCTTACTCTTAACACTTTTCTCTCTTCACTTCCTGTTTTCCTCTTTCGCCTCTGGTTATACTTCGAATGAGGTTAAGGAATGGTGCAGCCAAACTCCTAATCCTCAACCATGTGAGTATTTCTTGAGCAACAACCCTGAATACGAACACAAAGCCATCAAGAACAAATCTGATTTCCTCAAGCTTTCTCTTGTGCTCGCGCATGAACGAGCACTCAAAGGCCATGAAAACACTCTTACCCTAGGCTCTAAGTGCAGGAACCCACAAGAAAAGGTTGCATGGTCTGATTGTCTTGAGCTTTATCAGTACACAATCCATAGACTAAACAAAACCGTAGACCCTACCACGAAGTGCTCCCAAGTTGATGCTCAGACATGGCTCAGCACAGCTCTCACCAATCTTGAGACTTGTAAAGCCGGGTTCTATGAACTTGGGGTTCAAGACAATGTGTTGCCATTGATGTCCAACAATGTTACGAAGTTACTAAGCAATACTTTGTCTCTTAACAAGGTTCCATATCAAGAACCAAGTTACAAGAATGGGTTTCCAACTTGGGTCAAACCCGGTGACAGGAAGCTGCTGCAGACATCTTCTCCAGCTTCTAAGGCTAATGTTGTGGTGGCTAAAGACGGTTCTGGCAAGTACACTACTGTAAATGCTGCCGTAAGTGCTGCACCGAAGAGTAATAGTGGGCGGTATGTGATATATGTGAAGGCTGGAGTCTACAATGAACAAGTTGAGATAAAGTCAAACAATATCATGTTGGTGGGAGATGGTATTGGGAAGACTGTAATTACCGGTAGCAAAAGTGTTGGTGGGGGCACCACTACTTTCCGTTCTGCCACAGTTGGTAAGTAA 1017 0.4317 MTATSPLSSLYIKAGSLGHKNTSIQSTSKLKPYLKSYFPHLHSQAIEKATIAFRLLLTLFSLHFLFSSFASGYTSNEVKEWCSQTPNPQPCEYFLSNNPEYEHKAIKNKSDFLKLSLVLAHERALKGHENTLTLGSKCRNPQEKVAWSDCLELYQYTIHRLNKTVDPTTKCSQVDAQTWLSTALTNLETCKAGFYELGVQDNVLPLMSNNVTKLLSNTLSLNKVPYQEPSYKNGFPTWVKPGDRKLLQTSSPASKANVVVAKDGSGKYTTVNAAVSAAPKSNSGRYVIYVKAGVYNEQVEIKSNNIMLVGDGIGKTVITGSKSVGGGTTTFRSATVGK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00844 338 SUPERFAMILY Pectin lyase-like 251 336 IPR011050 -
Bach6g00844 338 Gene3D - 252 337 IPR012334 -
Bach6g00844 338 NCBIfam pectinesterase inhibitor domain 55 224 IPR006501 GO:0004857
Bach6g00844 338 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 224 IPR035513 -
Bach6g00844 338 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Bach6g00844 338 FunFam Pectinesterase 73 224 - -
Bach6g00844 338 Pfam Pectinesterase 257 337 IPR000070 GO:0030599|GO:0042545
Bach6g00844 338 CDD PMEI-like_3 81 223 - -
Bach6g00844 338 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 224 IPR035513 -
Bach6g00844 338 PANTHER PECTINESTERASE 61 337 - -
Bach6g00844 338 Pfam Plant invertase/pectin methylesterase inhibitor 77 221 IPR006501 GO:0004857
Bach6g00844 338 SMART PMEI_2 73 221 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00844 Bach-Chr6 6341126 6342142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00844 51 336 Carbohydrate Esterase AT2G45220 60.764 7.23e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00844 K01051 - gmx:100783964 468.388