Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00839 ATGGCTGGGGGTTCTGATGTGGCCGAGAGTGCCCTCTCTTGTGCTAACTGCGGAAAGCCTGCTCATCTTCAGTGTCCGAAATGCATGGAATTGAAGCTTCCCCGTGAAGGTTCTGCTTTCTGCACTCAGGATTGTTTCAAGTCGTCATGGAGCTCTCATAAGTCAGTGCATTTGAAGGCAAGACTGTCCTCACTTGGGACAGGCACTGCAGGTGAGCAAAATTCAGACGCACTTGGTGAAGGTTGGCAATATTGCTTGAAGAAAGGGCAGGCTCGAACTCCAAAGCTTCCTTTTTTTGATTGGACTGGGGCGCTGAGGCCATATCCCATATCCAATAAGCGAATTGTACCAGCTCATATTGATAAACCTGACTGGGCTAGCGATGGTATTCCCAAAATTGAGCTCAATAGTGATCTGCAGCATGTTGTTGAGATCAAAACTTCAGAACAAATTGACAGAATGAGAGAAATTTCTCGAATTTCAAGGGAGGTTCTAGACGCAGCTGCCCGTGTTATTCGGCCTGGCGTGACAACCGATGAGATTGACAGAGTTGTCCATGATGCTACTATTGCTGCAGGGGGATATCCATCTCCTCTCAATTACCATTTCTTCCCAAAGTCTTGCTGCACGTCAGTCAATGAAGTAATCTGCCATGGAATTCCTGATGCAAGGAAGCTCGAGGATGGTGATATTGTAAATATTGATGTCACTGTGTACTATAAAGGCGTTCATGGTGATCTCAATGAAACATACTTTGTGGGAAATGTTGATGAAGAGTCTAGACGGCTGGTACAATGCACATATGAGTGCCTGGAGAAGGCAATAGCTATTGTAAAACCTGGGGTACGATATCGTGAGATTGGAGAAGTTATTAATCGCCATGCTTCAATGTCCGGCTTCTCTGTGGTAAAATCATATTGTGGTCATGGAATTGGAGAGCTCTTCCATTGTGCACCAAATATTCCCCATTATGGAAAAAATAAAGCAGTTGGTGTGATGAAGGCTGGACAAACTTTCACAATTGAACCAATGATCAATGCAGGTGTTTGGCGTGATAGAATGTGGCCTGATGGATGGACTGCTGTCACTGCAGATGGCAAACGAAGTGCTCAGTTTGAGCACACTCTTTTGGTGACTGAGACTGGAGTTGAGGTTCTAACAGCGCGGGTCTATGATGAGAAATTGCAGATTCCAGAAGCAATGAATGATGTGATGCTTGTTGGTGATGGCATAGATGAAACAATTGTTACCGGTGACAGAGATGTAGCTAGTGCTGGTTCCACTTTATCTTCATCTACAGTTGATATATCTGGGGATGGTTTTTGGGCAAGGGACATCACCATCGAAAACACAGCAGGCTCATATAAGCACCAAGCAGTGGCACTAAAAATCAGCTCAGACAAATCTGTCTTCTACAAATGCAGCTTCAAAGGCTACCAAGACTTTATATTTGGTGATGCCGCCGCCATTTTCCAAGACTGCGACATATTTGTAAGAAAACCAATGCCGGGTCAGTTCAATTCCATCACAGCACAAGGAAGAGACACAGCAGATGAACCAACTGGCATTGTCATTCATGGGAGCCGTGTCAGTACTGGTTCTGATCTTTCTGCAGATTTGGGCTCATTCAAGACCTACCTGGGCAGGCCATGA 1653 0.4519 MAGGSDVAESALSCANCGKPAHLQCPKCMELKLPREGSAFCTQDCFKSSWSSHKSVHLKARLSSLGTGTAGEQNSDALGEGWQYCLKKGQARTPKLPFFDWTGALRPYPISNKRIVPAHIDKPDWASDGIPKIELNSDLQHVVEIKTSEQIDRMREISRISREVLDAAARVIRPGVTTDEIDRVVHDATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNVDEESRRLVQCTYECLEKAIAIVKPGVRYREIGEVINRHASMSGFSVVKSYCGHGIGELFHCAPNIPHYGKNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTARVYDEKLQIPEAMNDVMLVGDGIDETIVTGDRDVASAGSTLSSSTVDISGDGFWARDITIENTAGSYKHQAVALKISSDKSVFYKCSFKGYQDFIFGDAAAIFQDCDIFVRKPMPGQFNSITAQGRDTADEPTGIVIHGSRVSTGSDLSADLGSFKTYLGRP 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00839 550 NCBIfam methionine aminopeptidase, type I 144 388 IPR002467 GO:0006508|GO:0070006
Bach6g00839 550 Pfam zf-MYND-like zinc finger, mRNA-binding 15 58 IPR031615 -
Bach6g00839 550 Gene3D - 4 60 - -
Bach6g00839 550 SUPERFAMILY Creatinase/aminopeptidase 98 388 IPR036005 -
Bach6g00839 550 Pfam Pectinesterase 387 481 IPR000070 GO:0030599|GO:0042545
Bach6g00839 550 Gene3D Creatinase/methionine aminopeptidase superfamily 142 389 IPR036005 -
Bach6g00839 550 CDD MetAP1 151 387 IPR002467 GO:0006508|GO:0070006
Bach6g00839 550 Gene3D - 390 481 IPR012334 -
Bach6g00839 550 Gene3D - 482 550 IPR012334 -
Bach6g00839 550 FunFam Methionine aminopeptidase 99 394 - -
Bach6g00839 550 Hamap Methionine aminopeptidase [map]. 143 389 IPR002467 GO:0006508|GO:0070006
Bach6g00839 550 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 306 324 IPR002467 GO:0006508|GO:0070006
Bach6g00839 550 PANTHER METHIONINE AMINOPEPTIDASE 12 389 - -
Bach6g00839 550 PRINTS Methionine aminopeptidase-1 signature 230 246 IPR001714 -
Bach6g00839 550 PRINTS Methionine aminopeptidase-1 signature 208 221 IPR001714 -
Bach6g00839 550 PRINTS Methionine aminopeptidase-1 signature 300 312 IPR001714 -
Bach6g00839 550 PRINTS Methionine aminopeptidase-1 signature 331 343 IPR001714 -
Bach6g00839 550 Pfam Metallopeptidase family M24 153 380 IPR000994 -
Bach6g00839 550 SUPERFAMILY Pectin lyase-like 390 550 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00839 Bach-Chr6 6292615 6302229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00839 386 550 Carbohydrate Esterase AT3G60730 54.301 2.03e-59 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00839 K01265 - zju:107406731 737.643