Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00790 TCTCTCTCAACTTTCTGGTTAGAAGGTTAACTTGCTACAAGAGTAGACGAGTGGAAAGTGAGTAGAGAGAGACCAGAAAGGGAAGAGAAGTGAAGAGTTTCTGGGTTTTGCCTTTTGGTTTCAAATTCGCTTTAAGATTGCGTTGGTACCCTTTCTCCAGCAGAAAATCTATTTTCTTCGTGCGGTACGATGCTCATGTGACAATGGAAGCTCAGCCACTTCGGATTGTTCCCTCTTCCGATAACAGCGCCGGGCGAGGAGCTGGACCCCAATTGAAAATGGACAGGGAAAGAAAGATGGAAGATATTGATGGCAAGACGGGCCTGATGAAGAAAGAGTCATCGCCCGTTAGCCTTGGTCTTGGGGTTGGTGCTGCCGCAGACTCTGCTGCTATCAACCATCCTCCGATCGAAAGCGAGAATAAGCCTTTGTTTACAGAAGCTCAGAAGCGTGAGCTTCAACATCAAGCTTTTGTCTTCAAGCACATAGCAAATGGTCTTCCCGTTCCTCTGCACCTTGTTCTTCCCATTTTGAAGAGTGTGGCTGACACCTTTGCATCCGGCTTGGACGGGTTCTACAAGCAGTACCCAAGCTTTGTGAGATTCAATCACCTGGGTTTTGATTATGGGAAAATGGTGGATCCTGAACGACATAGGTGTAGAAGAACAGATGGAAAGAAGTGGAGGTGCAGTAAGAACGTACTGCCCGATCAGAAGTACTGTGAACGGCACATGCATAGAGGTCGTAATCGTTCAAGAAAGCCTGTGGAAACATCTGAGGTTAGCTCTTTTGCAATAACAAAGCCACCTGCCAAGTTACATGCCAAGCTAGGCTCAAACACAGAATTTGAAGTTCCGAACCCTTTAGGCATTCAACTCAGTAATACAACTACTCCATCCAGCGGCTTCTGTGAAGTCAACACTTGGTCTACAAATAGATGCAAGTTAATATGTTCTGCTGACACCCAAACCTCCTTTTCTCGTGCTGCTGTGGCAACCCTCAACTCCACTCCGGACAGTACAGCTAACGCAATGGCAAGTACTGTCAGCAGAACAACGTCTATTACTTCCAAAAGCAAAAGTAATCTAATTAATTACAAAACAGATGACAATGCCAAAAGCAGTTTGAGCTACAATGTCATCAACATTAGTAGCAATGGAAAAGGAAACATTAACAATGTTACTAATAACATCTCTGCCAGAATAGGCTTCTCTCCAAGGAGTGTTCTTCAAGGAAGTATTGTTTCCGGTTGCAATCACTCATGCCTCAACGACAGAAACAGCACAGAACTTGAGCCAGGAAGGTGTCGGAGAACAGATGGTAAGAAGTGGCGGTGCAGGAGTGCTGTTCTTCCTAATCAGAAGTATTGTGCTACGCACATGCATAGAGGTGCTAAGAAGCGTTTTGCAGACTCTGAACCAGCTCTTAGTTCTGCCGGCACCGTTACTATTGCACGGTTGCCTTCTTCTACAACCACAACCTACATTCAGAAAGCGTATTGTACAATTCCGAATACAAATCTTTCCATGTCAATCCCTACAAGTGCACCATTGGTACAACGCAATGAGAAAAGTCCTACCAGCAGTGATACTGATACCACTATCACTGACACCATGAATGAGTGTAGCTATGTTTCTTACTAAAACTGTCTCTTAAGGTAGAACCTGATTGTGACTAGTACATTATCATCGCTGATTACATGAACAAGCTAACATATCATCGTTCTGTATCAGTTTTGAGGAAATGGGGATGTAGTTGCAGTACTCCGGAAATGGATCCCTTGCAATAGGATCATAGCTGCAGTATGAGAGACAAGAATAGACCCTCTAGTTGGAAAATGAATTCTCTGCAGTAGGACCCTCTATTATTGTCTCTCATACTGCAACTACGGTGCTAATGCAGTATGCATGTCAGAGTACTCCGAGAAGGAAAAGATCAAAGGCTGGCTTGAAATATAATAACCATTGTTTGTGTATATTTTATATATATATATATATATATATATTTTTTATCTTTCTTACTTTTTGTTTATTTCTGCAAAATAATTACACTATTAAGAGTTGTACACAAG 2071 0.4278 MEAQPLRIVPSSDNSAGRGAGPQLKMDRERKMEDIDGKTGLMKKESSPVSLGLGVGAAADSAAINHPPIESENKPLFTEAQKRELQHQAFVFKHIANGLPVPLHLVLPILKSVADTFASGLDGFYKQYPSFVRFNHLGFDYGKMVDPERHRCRRTDGKKWRCSKNVLPDQKYCERHMHRGRNRSRKPVETSEVSSFAITKPPAKLHAKLGSNTEFEVPNPLGIQLSNTTTPSSGFCEVNTWSTNRCKLICSADTQTSFSRAAVATLNSTPDSTANAMASTVSRTTSITSKSKSNLINYKTDDNAKSSLSYNVINISSNGKGNINNVTNNISARIGFSPRSVLQGSIVSGCNHSCLNDRNSTELEPGRCRRTDGKKWRCRSAVLPNQKYCATHMHRGAKKRFADSEPALSSAGTVTIARLPSSTTTTYIQKAYCTIPNTNLSMSIPTSAPLVQRNEKSPTSSDTDTTITDTMNECSYVSY 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00790 479 ProSiteProfiles WRC domain profile. 146 190 IPR014977 -
Bach6g00790 479 SMART QLQ_2 75 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bach6g00790 479 ProSiteProfiles WRC domain profile. 362 407 IPR014977 -
Bach6g00790 479 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bach6g00790 479 Pfam WRC 364 400 IPR014977 -
Bach6g00790 479 Pfam WRC 147 189 IPR014977 -
Bach6g00790 479 PANTHER GROWTH-REGULATING FACTOR 5 349 461 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bach6g00790 479 Pfam QLQ 77 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bach6g00790 479 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00790 Bach-Chr6 5853310 5856235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00790 75 400 GRF Transcription Factor Family AT2G45480 34.957 1.24e-39 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bach6g00790 WRC 2.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00790 - - gmx:100795050 404.06