Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00786 ATGCAGATCTTTGTAAAAACTCTGACTGGAAAAACTATCACCCTTGAGGTGGAGAGCTCCGATACAATCGATAATGACAGAGAGGGTATCCCACCGGATCAGCAAAGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGTCGTACTCCTGCTGATTACAATATCCAGCAGGAATCGACCCTTCACTTGGTATTGCGTCTGAGTGGTGGAATGCAAATTTTTGTGAAAACTCTCACTGGGAAGACCATAACTTTGGAGGTTGAAAGTTCTGATACAATTGACAATGTCAAGGCTAAGATACAGGATAAGGAGGGAATCCCACCTGATCAACAGAGGCTTATCTTTGCTGGTAAGCCGCTTGAAGATGGTCGCACTTTTGGAGATTACAACATCCAGAAGGAATTTAGAAGAAAAATGGTAACACTAGACAAGATAAGGAGGCTATGCCGTTTCATACCCTTCAGCCTAAACACTGTACTGAGTCTTGCAATTTAG 495 0.4323 MQIFVKTLTGKTITLEVESSDTIDNDREGIPPDQQRLIFAGKQLEDGRTPADYNIQQESTLHLVLRLSGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTFGDYNIQKEFRRKMVTLDKIRRLCRFIPFSLNTVLSLAI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00786 164 ProSiteProfiles Ubiquitin domain profile. 71 134 IPR000626 GO:0005515
Bach6g00786 164 SUPERFAMILY Ubiquitin-like 1 70 IPR029071 -
Bach6g00786 164 PRINTS Ubiquitin signature 102 122 IPR019956 -
Bach6g00786 164 PRINTS Ubiquitin signature 81 101 IPR019956 -
Bach6g00786 164 PRINTS Ubiquitin signature 123 144 IPR019956 -
Bach6g00786 164 PANTHER UBIQUITIN 71 135 - -
Bach6g00786 164 SMART ubq_7 71 142 IPR000626 GO:0005515
Bach6g00786 164 SMART ubq_7 1 66 IPR000626 GO:0005515
Bach6g00786 164 FunFam Polyubiquitin 11 1 70 - -
Bach6g00786 164 ProSitePatterns Ubiquitin domain signature. 97 122 IPR019954 -
Bach6g00786 164 Gene3D - 1 70 - -
Bach6g00786 164 Gene3D - 71 150 - -
Bach6g00786 164 FunFam Polyubiquitin 10 71 147 - -
Bach6g00786 164 Pfam Ubiquitin family 3 67 IPR000626 GO:0005515
Bach6g00786 164 Pfam Ubiquitin family 73 133 IPR000626 GO:0005515
Bach6g00786 164 ProSiteProfiles Ubiquitin domain profile. 1 70 IPR000626 GO:0005515
Bach6g00786 164 SUPERFAMILY Ubiquitin-like 68 134 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00786 Bach-Chr6 5838589 5839150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00786 1 71 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 85.714 1.51e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00786 - K08770 pmum:103342112 245.743