Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00773 ATGGTGAGAGGGAAGACCCAGATGAGGCGCATAGAGAACGCAACAAGCAGGCAAGTCACCTTCTCCAAGCGGCGCAATGGCCTTCTCAAAAAGGCTTATGAGCTTTCAGTTCTTTGTGATGCTGAGGTAGCACTCATAATCTTCTCTCCAAGAGGGAAGATGTACGAATTCTCAAGCTCCGGTATCCAGGGCACAATAGAACGCTACCGCAGGCATACTAGAGATACTCGAGCAGCCAACAAGTCCAATGAACAAAATATGCAGCATTTGAAGCAGGAAGCTTCAAACATGATGAAGAATATTGAGCAACTTGAAGCGACAAAAAAGAAACTTCTGGGAGAAGGCTTAGGATCATGCACAGTGGAAGAACTCCAACAGATAGAACAACAGTTGGAAAGGAGTGTAAGAAGTGTTCGAGAAAGAAAGACTTTGGTGTACAAAGAACAAATGGAGCAACTACAAGAAAAGGCAGAAGCCCTAGAAGCTGAAAATGCAAGGCTCTCTGCGAAGTACAATATGCAGCAACATCAAGAAAATAGGGATCAGAGACAAAACCAACCATATGAAGAAAGTAGTCCAAGTTCAGATGTGGTAACTGAATTATTCATTGGACTACCAGAAACAAGAACTAGACGCATGCCTCCTAATTAGGCCTAACTGAAGAGTATGAAATCCCAGCCTTTGGAGATATAAAATAAGGGTAAGGCCAACTGTGTTTCAGTTATGTATATGATATTAAATATGTTCTCATGCTATCAATAATATTTGTGAGAGTAATCTTATATTTGTTTGATGATGCTGATGCTGATACAGTGATACTTACGGCAAGTAAATGACTTGTTATTGTATTAAGGCATATGTATACTTGTGGTTCAACTGTTGGAGGCAATATCCATTAGGGTTTAAG 907 0.4068 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSPRGKMYEFSSSGIQGTIERYRRHTRDTRAANKSNEQNMQHLKQEASNMMKNIEQLEATKKKLLGEGLGSCTVEELQQIEQQLERSVRSVRERKTLVYKEQMEQLQEKAEALEAENARLSAKYNMQQHQENRDQRQNQPYEESSPSSDVVTELFIGLPETRTRRMPPN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00773 216 Coils Coil 121 141 - -
Bach6g00773 216 Coils Coil 80 114 - -
Bach6g00773 216 MobiDBLite consensus disorder prediction 173 216 - -
Bach6g00773 216 SUPERFAMILY SRF-like 3 83 IPR036879 GO:0003677|GO:0046983
Bach6g00773 216 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach6g00773 216 FunFam MADS-box protein SOC1 14 95 - -
Bach6g00773 216 Gene3D - 14 98 IPR036879 GO:0003677|GO:0046983
Bach6g00773 216 Coils Coil 143 177 - -
Bach6g00773 216 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach6g00773 216 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach6g00773 216 CDD MADS_MEF2_like 3 75 IPR033896 GO:0000977|GO:0045944
Bach6g00773 216 Pfam K-box region 83 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach6g00773 216 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach6g00773 216 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach6g00773 216 MobiDBLite consensus disorder prediction 173 198 - -
Bach6g00773 216 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach6g00773 216 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach6g00773 216 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach6g00773 216 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00773 Bach-Chr6 5701203 5709187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00773 1 158 MADS-box Gene Family AT2G45660 73.418 5.19e-86 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach6g00773 K-box 4.7e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00773 6 5701203 5709187 Bach6g00773 6 5701203 5709187 ECH
Bach6g00773 6 5701203 5709187 Bach6g00774 6 5717028 5720444 ECH