Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00758 CTTAATTCCTCCAAACCCGTTCTCTTTCTCAATCTACCTCGCTCTCTTTGTGCTTATTTTCTCTATCAACTCCCTTCGGTGACAACGATTTGAGGGTGTACTTCATCGGCGTTTCAGTTTGGATTTTACACAGGTTTGCATCTTCTTCGCACGCGTCTGTCTCTGAAATCAAAGGATCTTTTTAGGGTTTCTTATTTTCCGATGGATCCCCGAGAATCCAAGTTCACTCCGATTTTAGTGATGATATTCAAGTTTTATGCACATCCGTGGTGGATATTAGGGTTTTCTATTTTAGGTTTCTTTAATTTTTATTTACGGTTTGCCGGAGGATCGGCGATCAACTGTTGAGGTTCTGGGTATCTCAAAACTTGTAAATTATTGGGTTTTGATCAATATCCGTCACGGGTTGTGTTCACCCGTAGTGTATTACTAAGTATTTTAGCATTTGATTTCCTTCTCGGTGGACCACTAGTTTGGTATTTAGGTTTTGTGATGGAATAATTGGGGGGCAGGAGATTTTGTGGTTTGATGGAAATTTATGTATTTATTGGTCACACTCTTCGTTACCCAGTCCATCTGGAGTAAATGGAAGTAAGCGAGCGTTATGGAGGATTGTATTGATAGAGTACAGTGCCTGACTTGGGATGTTATTCCGATCTGTTTTATAGACTATAGTATGGATATAAAGACTGCGAGAAGAACTGAACGAGTCAGTGGAGAAACCTGTGCATATTGGCTTGCTGGGAGGTGCAACAGAAACCCTTGTAGATTTTTGCACATAGAAACACCATTACCATCTCCTAAATATCATAATGCTGCTGGTACTCATCTCTATGCGAGGCAGTCCCATTCCCTTAATAAGAAGGCCCCTAAACGTAATAAGCAGATTGGACGAGGTGCGGTAAGCACAGCCAAGGATACTCAGAAGTCATCAAAAAGTATCTGTCGATATTGGATAAATAGCAATTGTGCACATGGTGATCAATGCTGGAACTTGCATTCATGGTTTGATGTGGATGGGCTTTCAACACTAGCAAAGTTACAAGAACACAAGAAGGCCATCACTGGAATTACTCTGCCAATTGGATCAGACAAACTTTATTCCGGCAGTAGTGATGGGACAGTTCGGATGTGGGACTGCAATACTGGTAAATGTGCAAATGTAATAAAAGTTGGTGCAGAAGTGGGGTGTTTGATCAGTGAGGGTCCATGGGTGTTTGTCGGTTTGCCAAATGCTGTTAAGGCTTGGAACATTCAAACAGATGCTGAGTTCGTTCTCAATGGGCCTCGTGGCCAAGTCTTTGCCATGATTGTTGCCAATGATACACTTTTTGCTGGGGCACAGGACGGTATTATTTATGCATGGAGAGGCAGTTCTGGAACTGAATGTCCTTTTGAACTGGTGGAATCACTAAGTGGCCACACTAAAGCCGTGGTTTGTCTAGCTGTTGGAGGCAAGATGCTGTTCTCAGGTTCCATGGACCATAGCATAAAGGTCTTGGATGTTGATACATTACAGTGTACGATGACACTGAATGGGCACACTGATGTAGTGATGTCCCTCATTTGTTGTGACCAGTTTTTGCTGTCATGCTCATTGGATCGCACCGTGAAAGTTTGGGTTGCCACTGAACAAGGGACTTTGGATGTAACATACACACACAATGAAGAACATGGAGTTCTTGCACTTTGTGGAATGACTGATGCTGATGCTAAGCCGATCTTGTTTTGCTCGTGTAATAACAATACAATTCACCTATATGACTTGCCATCTTTTTCTGAGAGGGGTCGATTATTTGCCAAAAAAGAAGTTCGAGCAATTGATATAGGTCCCGGAGGGCTCTTCTTTACGGGAGATGGGACTGGTTCGCTAATGGTGTGGAAATGGTTGGCAGCGCCCAAGGTGGCTTCTTCATGA 1918 0.4286 MEDCIDRVQCLTWDVIPICFIDYSMDIKTARRTERVSGETCAYWLAGRCNRNPCRFLHIETPLPSPKYHNAAGTHLYARQSHSLNKKAPKRNKQIGRGAVSTAKDTQKSSKSICRYWINSNCAHGDQCWNLHSWFDVDGLSTLAKLQEHKKAITGITLPIGSDKLYSGSSDGTVRMWDCNTGKCANVIKVGAEVGCLISEGPWVFVGLPNAVKAWNIQTDAEFVLNGPRGQVFAMIVANDTLFAGAQDGIIYAWRGSSGTECPFELVESLSGHTKAVVCLAVGGKMLFSGSMDHSIKVLDVDTLQCTMTLNGHTDVVMSLICCDQFLLSCSLDRTVKVWVATEQGTLDVTYTHNEEHGVLALCGMTDADAKPILFCSCNNNTIHLYDLPSFSERGRLFAKKEVRAIDIGPGGLFFTGDGTGSLMVWKWLAAPKVASS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00758 437 PANTHER - 78 435 IPR044715 -
Bach6g00758 437 ProSiteProfiles Zinc finger C3H1-type profile. 35 61 IPR000571 GO:0046872
Bach6g00758 437 Pfam WD domain, G-beta repeat 143 178 IPR001680 GO:0005515
Bach6g00758 437 Pfam WD domain, G-beta repeat 305 339 IPR001680 GO:0005515
Bach6g00758 437 Pfam WD domain, G-beta repeat 266 298 IPR001680 GO:0005515
Bach6g00758 437 PRINTS G protein beta WD-40 repeat signature 287 301 IPR020472 -
Bach6g00758 437 PRINTS G protein beta WD-40 repeat signature 165 179 IPR020472 -
Bach6g00758 437 PRINTS G protein beta WD-40 repeat signature 327 341 IPR020472 -
Bach6g00758 437 SMART c3hfinal6 109 134 IPR000571 GO:0046872
Bach6g00758 437 SMART c3hfinal6 35 60 IPR000571 GO:0046872
Bach6g00758 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 270 309 IPR001680 GO:0005515
Bach6g00758 437 Gene3D - 204 435 IPR015943 GO:0005515
Bach6g00758 437 SUPERFAMILY WD40 repeat-like 140 428 IPR036322 GO:0005515
Bach6g00758 437 Gene3D - 36 136 - -
Bach6g00758 437 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 146 178 - -
Bach6g00758 437 Gene3D - 137 199 IPR015943 GO:0005515
Bach6g00758 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 146 187 IPR001680 GO:0005515
Bach6g00758 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 310 339 IPR001680 GO:0005515
Bach6g00758 437 ProSiteProfiles Zinc finger C3H1-type profile. 108 135 IPR000571 GO:0046872
Bach6g00758 437 SUPERFAMILY CCCH zinc finger 109 133 IPR036855 GO:0046872
Bach6g00758 437 SMART WD40_4 263 300 IPR001680 GO:0005515
Bach6g00758 437 SMART WD40_4 344 387 IPR001680 GO:0005515
Bach6g00758 437 SMART WD40_4 139 178 IPR001680 GO:0005515
Bach6g00758 437 SMART WD40_4 390 427 IPR001680 GO:0005515
Bach6g00758 437 SMART WD40_4 303 340 IPR001680 GO:0005515
Bach6g00758 437 SMART WD40_4 218 255 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00758 Bach-Chr6 5601918 5605335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00758 134 309 Eukaryotic Initiation Factors Gene Family AT2G46290 26.396 8.07e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00758 - - gmx:100787799 582.793