Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00743 GTAAGTTCACAATTTTCCCAATACGTTAGGGTTTCACTCGCAAACGATCAAACAAGGTTGTAGAAGAGTTTCGTATCTTTGATTTTCTGGAAATGAGGTCAATCTTCTGTGGGAATCTGGATTTTGACGCGCGCCAGTCTGATGTTGAGAGACTCTTCAGAAGATATGGGAAAGTTGATAGAGTGGATATGAAGTCCGCATTCATTGCTTTTTCATTCCTCATGACTTTTGCTCAATGTTCAATTTCCGACATGTTTCAACATAGAAATCATCATGATTTCACAACAGTGGCAGGGTTTGCCTTTGTGTACATGGAAGATGAACGTGATGCTGACTATGCAATTAGAAGACTTGATAGAACAGAATTTGGTAGAAAGGGGCGTCGATTACGTGTTGAGTGGACTAAGCAAGAACGTGAGGGTAGAAGGCCAGGTGATTCAAGAAGATCATCATCCAATATGAGAGCGTCAAAGACACTGTTTGTAATAAATTTTGATCCAGTTCATACCAGGACAAGGGATCTGGAGAAACACTTTGAACCCTACGGGAAAATATTGAACATAAGGATCAGAAGGAATTTTGCCTTTCTTCAGTATGAATCCCAGGAGGATGCTACTCGAGCATTGGAGGCTACCAACATGAGCAAGTTCATGGATCGTGACATAACGGTGGAATATGCAATAAGAGATGATGATGACAGAAGGAGCACATACAGTCCTGATAGAAGAGGTCGTGACATCTCCCCTGATGGGAGATATGGTCGAGGGAGATCCCCAAGTCCTTACCGTAGAGGGAGGGGTAGTCCAGATTATGGTCATGGATCAAATCCGGCTTCCAGACAAGAACCAAGAGGAAGCCCCAAGTATGTCCGAGCTGAAAGCCCAGTGAACGGAAGATATGACAGTCGTTCGCCCCCTCCCCGAGAGAGGTCTCGTTCCTGAGAAGCCGAGTAGGATTGTCTGTGAAATTGTTGTTAGACCTTCTTGACTTATAATTTATTTTTGTTTCGTTTTTGCTGTCCATAGTTTGGCAGCAGACAAGACAATGCTTGTTTATTGCCTGTTTGTACTTTTATGTTCAGTTAGAACTTGAATGTGCAAAAAAAAAATGTTCAACCATTTCTTAAAGCTTTGGTTTTCGTTGTTTGTGGTTGAAGTATAAATTATGTTTGGGTATGGATGAAAGCTTTGTTTGTGAGCCTCGTTTTAGTGGAA 1214 0.4193 MRSIFCGNLDFDARQSDVERLFRRYGKVDRVDMKSAFIAFSFLMTFAQCSISDMFQHRNHHDFTTVAGFAFVYMEDERDADYAIRRLDRTEFGRKGRRLRVEWTKQEREGRRPGDSRRSSSNMRASKTLFVINFDPVHTRTRDLEKHFEPYGKILNIRIRRNFAFLQYESQEDATRALEATNMSKFMDRDITVEYAIRDDDDRRSTYSPDRRGRDISPDGRYGRGRSPSPYRRGRGSPDYGHGSNPASRQEPRGSPKYVRAESPVNGRYDSRSPPPRERSRS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00743 282 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 127 198 IPR000504 GO:0003723
Bach6g00743 282 MobiDBLite consensus disorder prediction 200 221 - -
Bach6g00743 282 FunFam Serine/arginine-rich splicing factor RS31 119 209 - -
Bach6g00743 282 SUPERFAMILY RNA-binding domain, RBD 120 225 IPR035979 GO:0003676
Bach6g00743 282 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 106 IPR000504 GO:0003723
Bach6g00743 282 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 128 260 - -
Bach6g00743 282 Gene3D - 1 121 IPR012677 -
Bach6g00743 282 SUPERFAMILY RNA-binding domain, RBD 2 124 IPR035979 GO:0003676
Bach6g00743 282 SMART rrm1_1 128 194 IPR000504 GO:0003723
Bach6g00743 282 SMART rrm1_1 3 102 IPR000504 GO:0003723
Bach6g00743 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 94 IPR000504 GO:0003723
Bach6g00743 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 129 191 IPR000504 GO:0003723
Bach6g00743 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 35 IPR000504 GO:0003723
Bach6g00743 282 Gene3D - 122 207 IPR012677 -
Bach6g00743 282 MobiDBLite consensus disorder prediction 200 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00743 Bach-Chr6 5507608 5510776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00743 31 196 Eukaryotic Initiation Factors Gene Family AT2G23350 28.571 5.35e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00743 K12893 - gmx:100797778 384.03