Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00710 ATGTCGTTCACTGGAACTCTCGATAAATGCAAGGCTTGTGACAAGACTGTTTATGTGGTTGACATGATGTCTCTTGAAGGTGTACCTTACCATAAAAACTGCTTCAAATGCAGTCACTGCAATGGAGTTCTTACGATGAGCACATACTCCTCAATGGATGGTGTCCTCTATTGCAGACCACATTTTGAACAGCTTTTCAAGGAATCTGGGAATTTCAGCAAGAATTTCCAGAACGGTGAGATCAATTAA 249 0.4096 MSFTGTLDKCKACDKTVYVVDMMSLEGVPYHKNCFKCSHCNGVLTMSTYSSMDGVLYCRPHFEQLFKESGNFSKNFQNGEIN 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00710 82 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Bach6g00710 82 FunFam LIM domain and actin-binding 1 4 74 - -
Bach6g00710 82 PANTHER OS06G0237300 PROTEIN 6 77 - -
Bach6g00710 82 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Bach6g00710 82 CDD LIM1_SF3 6 68 - -
Bach6g00710 82 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
Bach6g00710 82 SMART lim_4 9 61 IPR001781 -
Bach6g00710 82 Pfam LIM domain 10 65 IPR001781 -
Bach6g00710 82 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 76 - -
Bach6g00710 82 Gene3D Cysteine Rich Protein 5 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00710 Bach-Chr6 5280236 5280730 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach6g00710 LIM 6.8e-13 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00710 - K09377 hbr:110669517 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00710 6 5280236 5280730 Bach6g00710 6 5280236 5280730 ECH