Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00706 AGCCAATCACTTTTCCCCTCCGTTTTTTGGCTCTGAAAAATCTCTCACTGAAACAAAAGACCTCAAATGCTCTGTTTTATTGCACTCTTCTTGCTGTAGATCTGTACAAAGTCCTAGCGATTTTTGCCTCCAATTTTCGCTTCCTTGAAAACCCCAATCATTTTTTTTCCCTTATAGCTCTGTATAATACTTGCAATTTTAGGTTTTTCTTCGTAGATTTTGGTAGTTTTGGTTTCAACCGCTAGCTGTAACCAGAAGCATTCGCGAGTCTGGCTCCAATTTGCAATTCTGTTTCGAAACAGAAACCCTAGTTTCGTAGATTTTTTTTTTTTTTTTTTTATACTTGTACATTGTTTTCGTTAACCCTTTTGAGGCGTTGATTTGGAATCGGTGGAATGAATAACAGAGCAAGATACCCACCTGGGATCGGTATGGGTCGAGGTGGAGGGATGAACACGAACCCTGCTTTTCAGCCTAGACCCCCTCAGCAACAGTACGTGCAGAGGAATTTCGTGCAAAATCAACAGCAATATCAGCACCATCAACACCACCAACAGCAGCAGCAACAGTGGCTGAGAAGGACGCAGATGGGTGGTAATGATGCCACCGTGGTTGACGAGGTGGAGAAGACTGTGCAGTCTGAAGCGGTTGACCCAAGTTCACAAGATTGGAAGGCAAGACTAAAAATACCATCACCTGATACCCGCTACCAGACAGAGGATGTGACAGCAACTAAAGGAAATGAATTTGAGGATTACTTTTTGAAACGTGAACTGCTTATGGGAATTTATGAAAAGGGGTTTGAAAGGCCTTCTCCTATTCAGGAAGAAAGTATTCCAATTGCTCTTACTGGAAGTGACATTCTTGCTAGGGCTAAAAATGGAACTGGCAAAACAGCTGCTTTTTGCATTCCTGCATTGGAAAAAATTGATCAGGATAATAATGTTATTCAAGTTGTTATACTAGTACCAACAAGAGAGTTGGCTCTGCAGACATCTCAAGTGTGTAAGGAGCTGGGGAAGCATTTGAATATTCAAGTTATGGTCACAACTGGTGGTACCAGCCTGAAGGATGATATCATGCGTTTATATCAACCAGTTCATTTACTTGTTGGAACTCCAGGAAGAATATTAGATCTTGCAAAAAAGGGTGTTTGCATTTTGAAAGATTGCAATATGCTTGTTATGGATGAGGCTGATAAGCTTCTGTCCCCCGAGTTCCAACCTTCAGTGGAGCAGCTGATTCATTTTTTGCCTCAAACTCGCCAAATCCTGATGTTTTCTGCTACATTTCCTGTTACTGTTAAGGACTTTAAAGATAGATATCTTCATAAATCATATATAATTAACCTTATGGATGAGCTAACTCTGAAAGGTATTACACAATTTTATGCATTTGTGGAAGAGCGACAGAAAGTGCACTGCCTGAATACCCTTTTCTCTAAGCTACAAATAAACCAGTCAATTATCTTCTGCAATTCAGTGAATCGAGTTGAGCTTCTTGCCAAAAAAATAACAGAACTTGGGTATTCATGTTTTTATATTCATGCAAAGATGTTGCAAGATCATCGAAACAGAGTATTTCATGACTTCCGCAATGGTGCATGTAGGAATCTTGTTTGTACCGATCTTTTCACTAGGGGAATAGACATTCAGGCGGTCAATGTGGTTATTAATTTTGATTTTCCCAAGAACTCAGAAACTTATCTGCACAGGGTTGGTCGGTCTGGGAGGTTTGGGCACCTTGGTTTAGCAGTAAATTTGATCACTTACGAGGACCGCTTTAACTTATATAGGATTGAACAAGAACTTGGCACTGAAATAAAGCAAATTCCACCACACATTGATCAGGCGATTTATTGCCGGTGATTAGTGGTAAATATCAGGGTTGTGTTCACAACAGTGACTGAGCGACAATGGCTGTTCTGATTATCCATAAACGACAGGTGTGTATGTAGATCTGCACAAGGATGCAGTTTGAAAATTCGGTTGTTGTTGGTCCCTTTGTTGAATGCTTTTTATTAATTAGTTTCTTGTTGAGAGCCATAAAACATTAGTATATATTGAGAAAGTTTAAGGTTGGCTTATTATAACTGCCTGGTAGATGGTGGGTAGGTCCAGTTTGGGTTTTATTGGACTACATTTGCAGATGGGTTTGTTACTAAATATTATGACTAGTTTTTCATTGTTGTACTGTTTAATTAAGGTTGTACTTGATGCAGAATGTATCCTTCTTTAACACTATGCTATTTAGTCTGTCATTGTGGTTTTCATCATAA 2278 0.3938 MNNRARYPPGIGMGRGGGMNTNPAFQPRPPQQQYVQRNFVQNQQQYQHHQHHQQQQQQWLRRTQMGGNDATVVDEVEKTVQSEAVDPSSQDWKARLKIPSPDTRYQTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCNMLVMDEADKLLSPEFQPSVEQLIHFLPQTRQILMFSATFPVTVKDFKDRYLHKSYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00706 490 Gene3D - 321 490 IPR027417 -
Bach6g00706 490 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 147 317 IPR014001 -
Bach6g00706 490 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 327 487 IPR001650 -
Bach6g00706 490 Pfam Helicase conserved C-terminal domain 342 448 IPR001650 -
Bach6g00706 490 FunFam ATP-dependent RNA helicase DDX6 97 320 - -
Bach6g00706 490 SMART helicmild6 367 448 IPR001650 -
Bach6g00706 490 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 52 489 - -
Bach6g00706 490 MobiDBLite consensus disorder prediction 1 29 - -
Bach6g00706 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 470 IPR027417 -
Bach6g00706 490 CDD SF2_C_DEAD 328 457 - -
Bach6g00706 490 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 263 271 IPR000629 -
Bach6g00706 490 SMART ultradead3 135 331 IPR014001 -
Bach6g00706 490 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 116 144 IPR014014 GO:0003724
Bach6g00706 490 CDD DEADc_DDX6 118 318 - -
Bach6g00706 490 FunFam ATP-dependent RNA helicase DDX6 321 490 - -
Bach6g00706 490 Pfam DEAD/DEAH box helicase 141 305 IPR011545 GO:0003676|GO:0005524
Bach6g00706 490 Gene3D - 89 320 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00706 Bach-Chr6 5257980 5263488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00706 118 487 Eukaryotic Initiation Factors Gene Family AT3G19760 38.172 1.53e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00706 K12614 - qsa:O6P43_027218 860.522