Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00703 ATGGATCGGGGGGATCAAATGGCATTGTCAGGGTCTGCATCTTACTATATGCAGAGAGGAATAGCTGTTTCTGGAGCACAGCCTGAGCTGCTAAGTATTCGTCCCTTGTCGAATCCAAATGTATCATTTCAACCTGGCATAGGGGTTGGTAACATTGGATCCTCCCTACCATTAGAATCTTCGTCGATTTCACCTCATGGTGTCAATGTGGGTGCTCCTGCTGGGGCGCTACCTGGGGAACCTGTCAAAAGGAAGAGAGGAAGGCCTAGGAAATATGGGCCTGACGGGGCTGTATCATTGGCATTAACTCCATCATCCTCTAGTCATCCTGGAACCATGATGATGCAAAGCCAGAAACGTGGTAGAGGTCGCCCACCTGGGACAGGGAAGAAACAACAGTTGGCTTCTCTTGGTCAATTAATGTCTGGTTCAGCTGGCATGGGTTTTACTCCCCATATCATCACCATTGCAGTTGGAGAAGACATTGCTACAAAAATAATGGCATTTTCACAACAGGGGCCTAGAGCTGTATGCATTTTGTCAGCCAATGGTGATGTCTCCACTGTGACACTTCGTCAGCCTTCAACTTCTGGTGGCTCTGTCACATATGAGGGACGTTTCGAGATATTGTGCCTTTCAGGCTCTTACTTGGTTACTGATAGTGGTGGCTCCCGCAACCGAAGTGGTGGACTCAGCGTCTCCCTTGCTAGCCCAGATGGCCGTGTCATCGGCGGAGGAGTTGGTGGAATGCTTATTGCAGCAAGTCCAGTTCAGGTGATAGTTGGGAGCTTTGTATGGGGAGGATCAAAGACAAAGAACAAGAAAAGGGAAGATGGTGAAGGTGCAGAAGTTGGTATGGATTCTGATCATCAGGCAGTTCATACTCCAGTGGCATTGAATAGCATTTCGCAAAATCAAAATCAAACAACTCAGAATTATACTCCAACCTCATCCATAGGTGCTTGGCCAGCGTCGCGTCCATTGGATATGCGTAATTCCCATGTTGACATTGATTTAATGCATGGGTGA 1029 0.4781 MDRGDQMALSGSASYYMQRGIAVSGAQPELLSIRPLSNPNVSFQPGIGVGNIGSSLPLESSSISPHGVNVGAPAGALPGEPVKRKRGRPRKYGPDGAVSLALTPSSSSHPGTMMMQSQKRGRGRPPGTGKKQQLASLGQLMSGSAGMGFTPHIITIAVGEDIATKIMAFSQQGPRAVCILSANGDVSTVTLRQPSTSGGSVTYEGRFEILCLSGSYLVTDSGGSRNRSGGLSVSLASPDGRVIGGGVGGMLIAASPVQVIVGSFVWGGSKTKNKKREDGEGAEVGMDSDHQAVHTPVALNSISQNQNQTTQNYTPTSSIGAWPASRPLDMRNSHVDIDLMHG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00703 342 SMART AT_hook_2 119 131 IPR017956 GO:0003677
Bach6g00703 342 SMART AT_hook_2 83 95 IPR017956 GO:0003677
Bach6g00703 342 MobiDBLite consensus disorder prediction 69 132 - -
Bach6g00703 342 ProSiteProfiles PPC domain profile profile. 145 286 IPR005175 -
Bach6g00703 342 MobiDBLite consensus disorder prediction 302 325 - -
Bach6g00703 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 149 266 - -
Bach6g00703 342 Gene3D - 151 284 - -
Bach6g00703 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 265 IPR005175 -
Bach6g00703 342 MobiDBLite consensus disorder prediction 302 321 - -
Bach6g00703 342 FunFam AT-hook motif nuclear-localized protein 1-like 151 281 - -
Bach6g00703 342 MobiDBLite consensus disorder prediction 100 115 - -
Bach6g00703 342 CDD DUF296 150 264 IPR005175 -
Bach6g00703 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 65 312 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00703 Bach-Chr6 5216412 5220311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00703 1 342 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 49.051 9.64e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00703 - - gmx:100799791 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00703 6 5216412 5220311 Bach6g00703 6 5216412 5220311 ECH