Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00662 ATGGGCTTTCCGGTTGGATACATTGAAGTTTTCTTCCCGAATATCTTCCTCCACACTTTCTCCCTTCTAGGTTTCATGCGCCACCTCATTTTCTTGCTCTTCCATTATCTGGGTCTCTTAGATTTCTTCGAAACCGACGTCGTTTGGTCCGAGCCCCACACCCAGCTACCCGAAAACTCACCCTTGTCGGCGTTCCTGATCCGGGAGTTTCTACCAGTCATCAAATTCAGTGAGCATGTAACAGCGGCCGGAGCGGAGCACACACCGGAAAGTTGCGCCGTTTGCCTGAACGAGTTCGAGGGCGAGGAAGAAATCAGATGCTTAACGAACTGCAAGCACATTTTCCATCGGGCTTGTCTGGACCGTTGGATGGATCATGATCAGAAAACGTGTCCTCTGTGTAGGACCCCTTTTGTGTGA 420 0.5048 MGFPVGYIEVFFPNIFLHTFSLLGFMRHLIFLLFHYLGLLDFFETDVVWSEPHTQLPENSPLSAFLIREFLPVIKFSEHVTAAGAEHTPESCAVCLNEFEGEEEIRCLTNCKHIFHRACLDRWMDHDQKTCPLCRTPFV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00662 139 FunFam RING-H2 finger protein ATL73 67 139 - -
Bach6g00662 139 ProSiteProfiles Zinc finger RING-type profile. 92 135 IPR001841 -
Bach6g00662 139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 139 IPR013083 -
Bach6g00662 139 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 138 - -
Bach6g00662 139 SMART ring_2 92 134 IPR001841 -
Bach6g00662 139 Pfam Ring finger domain 91 135 IPR001841 -
Bach6g00662 139 SUPERFAMILY RING/U-box 91 138 - -
Bach6g00662 139 SMART ringv_2 91 135 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00662 Bach-Chr6 4888913 4889332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00662 1 139 C3H Transcription Factor Family AT1G63840 49.655 1.01e-40 132