Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00638 ATGGTCGATGGCGTTGAATTATCCAGAACGATTTGCTCAATTTGCTTCGAAGATTTGAAACCCGTCGTTGAAGACCTCCAATCTATCTGTATTTGCGGTCATGTCTTCCACGAACTCTGTTTGCAGCAGTGGTTCGAGTACTGTGCAAGAGCAAAGAAGTATAGTTGTCCGGTTTGTAAGCAGAATTGTAGAGCAAGCGATGTGTCTCGGCTTTATTTCCAGTCGGTTGGAGACGCGAGCGATGTTTCTCTGCCAGAGAAACCTATGGATTGTGAGGTAGATGCTGGGGTTTTACGCAGAGAAGTGAAAAGATTGGAGGTGATAGTTTCTGGCCTCAGTTCATCAGTGGAGCGGCAAGTTAAGGAATTAAGAGAGCTTAATGATGAGCTATGTGCTTGCAAGGAGCAGGAAAAATTAGAAATAACATTAAAAAATGAAGCCGTGACAAAAAAAACATTCATACAACAGCAGCTTAATGTGAAATCAGCAGAGCTTGAGAAAACAAATTTGGAGTGTTCAAGATTACAAGATAGAAACATGGCATTGGCTAAAGAACTTGCAGCATTCAAATTAGTGTCTGATTTGGATCTAGATGAGGAGAATATTTTGAAGTATGCCTCTTTGGGTAGTGGGGCTAGCAGCAAAGATACGATAGACACATTGAGAAAATCTTTGGTCTTGCGGAACAGGAGTTACAAAGAATTAATCACCAAGTGCAATCTTCTAGGAAGAGGGGAGGCTCGCTATAGTAAAAAACTTGAAAAGGCCAGAGAGAAGATCAATAAACTAAAGGCAAGGGTACAAGAACTGGAGACAGCTGCTGAAGTAAGAGAGAATGATGTTTTGAGGTCTCTGAAATATTCAAAGAAAACAAATGGTACAAAGAATCTTGAAAATAGTATCAATTGTAATTCTGATCCCTTGTCAGCCAGCAAATTTTCATCAAAAGAGCAAGGGAACCAATTTTTGACAGTCATATCTAGAATAGATCAGACTGGGAACATCACCAATAAATCATTACAATCTTTGGAGACAGAGAACTTTAATTTTACAGAAAATAAAGATGTGAAGTTTGGCCAAGAAAGTAGAATTACCATGTCACTTGATGAAGAGGGAGAAGGCATCTTAGTAGATGAAAATGCTTCAACATTTACTATAGATTTACCAGGTGTTGCTGTTAGGAAGCCCAATCTTGCAAAGTCCGAGGTGGCTTCTGGTGTGGATAAAGAAAAATATAACCTGGCTGAGCCTCCAGGAATTGATCTCGACAATGACCTCGGTAACGCTCCTTCAGTCGCCATGGATGATTTGACGATTTTTGATAATGATAAAGAAGTTTTACCCAAGATAAACATTAGAAAAGAGAATCCATGGCCATCAGCACTTCCCAGGGATATCTGTTTTTCCGGTGGATTGCTTGGTCCTGATGGAACTCAGCGATTCTTGGGTAAATGGTGCAAACGTGCACAGAACAGGGATTCTGTATCGGCAAAAGGTTCAAGTAATGGTGATTTAATAGCTGTTGGGGCAGATGGTAGAGGTGGTAGGGTTAAAGTTCTAAGATCTCACAACCAATTCACACTGGATAATAAAGAGAATTCAGCTAGTTCAAAAAGGTTGAAAGTTGGGCCTCAAAAAGGCAGTTTGCAGTCCCGGGGATGCTTGCAGATAGAACACTTCTTTGCGAAGGCCACTGAGTAA 1701 0.4062 MVDGVELSRTICSICFEDLKPVVEDLQSICICGHVFHELCLQQWFEYCARAKKYSCPVCKQNCRASDVSRLYFQSVGDASDVSLPEKPMDCEVDAGVLRREVKRLEVIVSGLSSSVERQVKELRELNDELCACKEQEKLEITLKNEAVTKKTFIQQQLNVKSAELEKTNLECSRLQDRNMALAKELAAFKLVSDLDLDEENILKYASLGSGASSKDTIDTLRKSLVLRNRSYKELITKCNLLGRGEARYSKKLEKAREKINKLKARVQELETAAEVRENDVLRSLKYSKKTNGTKNLENSINCNSDPLSASKFSSKEQGNQFLTVISRIDQTGNITNKSLQSLETENFNFTENKDVKFGQESRITMSLDEEGEGILVDENASTFTIDLPGVAVRKPNLAKSEVASGVDKEKYNLAEPPGIDLDNDLGNAPSVAMDDLTIFDNDKEVLPKINIRKENPWPSALPRDICFSGGLLGPDGTQRFLGKWCKRAQNRDSVSAKGSSNGDLIAVGADGRGGRVKVLRSHNQFTLDNKENSASSKRLKVGPQKGSLQSRGCLQIEHFFAKATE 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00638 566 Coils Coil 109 129 - -
Bach6g00638 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 83 IPR013083 -
Bach6g00638 566 Pfam Ring finger domain 11 60 IPR001841 -
Bach6g00638 566 ProSiteProfiles Zinc finger RING-type profile. 12 60 IPR001841 -
Bach6g00638 566 SUPERFAMILY RING/U-box 7 64 - -
Bach6g00638 566 SMART ring_2 12 59 IPR001841 -
Bach6g00638 566 Coils Coil 158 185 - -
Bach6g00638 566 Coils Coil 246 280 - -
Bach6g00638 566 CDD RING-H2 12 60 - -
Bach6g00638 566 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 564 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00638 449 564 C3H Transcription Factor Family AT4G01270 42.857 4.97e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00638 K11985 - gmx:100812811 654.055