Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00608 ATGATGGAGGAAACCAGGTTCTCCGACAAGTTTACTAGTTTCTCTGAGCAGAGGATTGTTACAAACAAGATAGTGAAGTATGGGCTTCCAGGTGGGGCTCCGAAGGTTATTCGGGTTTCGGTGGCTGACAACTATGCCACAGATTCCTCCAGTGATGAAGATGACGAAGGAAGGCAAAATCAACAACCCAGAGGAAAGAAAATTGTGAATGAGATCAGGATTGATGATTGTTCCTACAGAGACACCCATGGAGTTAATAATCCATCTAAACAGAAGTCTAAGCTTGACAGGACCAGAACAGAACAGCTTCCCGGGAAGCAAAAGAAGTTTCGTGGCGTCCGGCAACGGCCGTGGGGGCGGTGGGCGGCGGAGATCAGAGATCCCTTGAAGAAGACAAGAGTGTGGCTCGGCACCTTCGACACTGCCGAGGAGGCAGCAATTGTGTACGACAAGGCAGCAATTAAGATCCGAGGTCCAAATGCTCTCACAAATTTCTCTAAACCACCGGAAAAATCTTCACCGTGTTTACATTTTGATACTGATAATGATGGCCATTGCGAATTCAAACCAAGTCTGGGCAGTTATGGTGTCTTTAATCCCGACTATGATTCAGGTAAAGAGTACCATGATTTGCCTTCACCCACCTCTGTTTTGAGATTTCAGCCCATGGAAAACGGAGCAGAGGTATCTGGATCCGAATGGCTTACCTTTCAATACTCCCAAGTCAAAGAAGAACAAGAAGAATCATGTTTTCAAGTCGATAACGTTTCGTTTTTGGATTCACCATTATTTCATCTTTATTCAGATTGTTATGAAGCTCCTCCACCACCTTTTTTCGATTTCCATGAAGAAACATTTGTAACCCAGTTGATTTCTAATCACAATTATGAAGACGAATCCTTTCGTCTCGATGAAGATTTTGAATCCTGTATAGATAGTTACTTTTGA 948 0.4367 MMEETRFSDKFTSFSEQRIVTNKIVKYGLPGGAPKVIRVSVADNYATDSSSDEDDEGRQNQQPRGKKIVNEIRIDDCSYRDTHGVNNPSKQKSKLDRTRTEQLPGKQKKFRGVRQRPWGRWAAEIRDPLKKTRVWLGTFDTAEEAAIVYDKAAIKIRGPNALTNFSKPPEKSSPCLHFDTDNDGHCEFKPSLGSYGVFNPDYDSGKEYHDLPSPTSVLRFQPMENGAEVSGSEWLTFQYSQVKEEQEESCFQVDNVSFLDSPLFHLYSDCYEAPPPPFFDFHEETFVTQLISNHNYEDESFRLDEDFESCIDSYF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00608 315 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Bach6g00608 315 MobiDBLite consensus disorder prediction 90 108 - -
Bach6g00608 315 SMART rav1_2 109 172 IPR001471 GO:0003700|GO:0006355
Bach6g00608 315 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Bach6g00608 315 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Bach6g00608 315 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Bach6g00608 315 SUPERFAMILY DNA-binding domain 109 166 IPR016177 GO:0003677
Bach6g00608 315 CDD AP2 108 165 IPR001471 GO:0003700|GO:0006355
Bach6g00608 315 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 34 224 - -
Bach6g00608 315 MobiDBLite consensus disorder prediction 51 80 - -
Bach6g00608 315 MobiDBLite consensus disorder prediction 44 111 - -
Bach6g00608 315 Gene3D AP2/ERF domain 108 167 IPR036955 GO:0003700|GO:0006355
Bach6g00608 315 FunFam Ethylene-responsive transcription factor 2 108 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00608 Bach-Chr6 4504553 4505500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00608 33 221 AP2-EREBP Transcription Factor Family AT4G27950 44.041 1.52e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach6g00608 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00608 - - qsa:O6P43_017734 241.506