Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00602 ATGGCTGCAAATGGTGGCACAGGAACTGAAGAGCACAAGAGGAAAGCTAATGGTTGCAATCTCAATCCTGGGTGGCAACAAAGTATGTTAAGGTCACCTAGAATGAGAATGTCTGTGAGGAAGGATTGGCCAATTGAAAATGCAACTGGCAATGAGGAGGATATGAATTTGACTAGGTATCTTGCTTCTTTAGCTGGATCTGGACCTCCTAGTACTAGTTTTTGTTCTACGACAGATACTGAGTTCACTGCTGGAGAGTCTAATGTTAGAAATTATAAGAACTCCAACTTGGCTTTGGTTAGCTATCCACACGGTTCCAGACAGTGTCCGAAGGATAAAACAGAAAATGAAAAACAAGTACCATTCAGGGTAAGCAAGGAAGTTAAGGAAATGGATTCTGATTTTTGGAGCCAGAAGTCTTTGTCCAGCAAGAAAGTCACTGCAAATATAACCGACAAGGACATGACAATCAACTCAACCAATGCACTTGTTGTCGGTAAAAAGAACAGTTCATCAACATATAATTTTCCCCAATTGAAGGGAAAGGGAGTCATCTGCATAGATGATGACACTTGCATTGGGGGAGCAGTAATGAGCCATGAGGGTGAAACACCTGCTTCTGTGGCTAATTTTCATTCTGATACACTGTTGAAGTCAGATGCTGATGATAATAAGCCTTGTTTGCAAAGAATTGCCAAGTCTGGCAAAGAATCCTCCTTTGAAGGTGGGATCAACTTAAGAGAGTGGCTCAAGAATGCTAATCATAAAATAGATAAATCTGAAAGCCTACACATATTTAAGCAGGTCCTTGAATTTGCTGATTCTGCACACTCCCAAGGATTTGTGCTACAAGACTTTGGACCATCATGTTTTGCATTATACCCTTCAGGTAAAATTAACTACATTGGCTCGTCAGGCCAAGGGGAAGATAATGTTATGAGCTGCAATGTGACCAAGAAAAGGCCTCTGGAACAGGATATGTGTGCTTTTCATAGTATGGGAGAAAAGCAGCTAAAGCTTTGCCAGGAGACTAGTCCTCTCAGGCAACACCATCACTTCAATAATGGCCGCAAGACAAGAAAAGTAAATCAGGATTCTTGCACAAATGGATCCATTGATTCAACGAATAGGGGAAGTGAGTATGAAAACAGTTTCGGCTGCCAACAATTTTTTACTGGAGAAGAGCAGTCTGTGTCTGTAATTGTGCAGCTGGAAAAGAATTGGTATTCTAGTCCAGAAGAGCTTAGTGATGGAAGCTGTACATTTTCATCAAATATTTACAGCCTTGGAGTTCTTCTTTTTGAGTTACTTTGCAATATTGATTCATGGGAGACACGTTCAGCAGCAATGTCGGATTTGCGCAATCGAATCTTACCTCCAAGGTTTCTATCAGAAAACCCAAGGGAAGCTGGATTTTGTCTTTGGCTTCTGCATCCTGAACCTTCTTCTCGTCCAAATGCGAGGATGATTTTACAGTCTGAATTATTACAAGAGTTAGAGGAACTACATTCTGGAAATGATGTATCAGCTTCGCCATCATCAGATACTGAGACGGATGGATTACTAAGTTTTTTAATTTTACTGGGAGAAGAAAAGCAAAAGCAGATAGCTAATTTAACTGAAGAGATAAGTTGCTTGAAAGGAGATATTAACGAGGTTGAGAGAAGGTACTCATTTGGGAGAGCCTCAGTGGAAAAGCATTTTCCTGAATTGAGAAGAAACAGTTTCAGTTTTCAAGACCCTTTCAGTTCAGATACTTGCAAATCAATTTCAAGAACAAGTGTTAATGAATCCACATTGATGAGAAACATCAATCAGCTACAGGAAGCTTACTTTTCAATGAGATCCCAAATCCTGCTTAGGGAAACTGCAGCTGTTGCACGCCATGATCAAGATGTGCTAAAAAATAGAGGGAGAATATTGTCTCATGTACAGAATGATAACGAGGTGCCAAGAAGAAATCAGAAATCTGTTGATTGTCTTGGATCCTTCTTTGAAGGTTTATGCAAGTTTGTTCGTTATAGCAAGTTTGAAGAGCGTGGTACATTAAGAAATAGAGATCTGCTTAATTCTGCCAATGTGATGTGTGCTTTAAGTTTTGACCGTGATGAGGACTACATTGCAGCAGCTGGAATTTCAAAGAGAATCAAGATTTTTGACTTCAGTGCTATTTTAAGTGATTCTGTTGACATCCACTACCCTATTGTTGAGATGTCAAACAAATCAAACCTTAGCTGTGTGTGCTGGAATAGCTACATCAGAAACCATCTCGCATCTACTGACTATGATGGTGTCGTTCAGATGTGGGATGCAAGCACGGGTCAACCATTTTCTCAATACAAGGAGCATCAGAAGAGAGCATGGTCTGTTCATTTTTCTGATTCTGACCCGAAATTGTTTGCCAGTGGAAGTGATGATTGCTCTGTCAAACTTTGGAACATCAACGAGGCACGCTTTCTTTTATTCACTTTGGAGGGACTTGAAAAAAATTCTCTCGGCACCATTCGGAACCCTGCCAATGTATGCTGTGTTCAGTTCTCTCCTTTCTCAACAAATCTTTTATTCTTTGGATCAGCTGATTACAAGATCAATGGTTATGATCTTCGGCACACTAGAATCCCTTGGTGCACATTAGTTGGCCATGGCAAAGCAGTTAGCTATGTGAAATTTGTAGATGCTGAAACACTTGCCTCTGCTTCCACGGACAACTCTTTGAAGCTCTGGGACCTGAAGAAAACCATCTCTTCTGGGTTGTCATCAAGTGCTTGTGACTTAACCTTCAAAGGCCACAGAAACGAAAAGAATTTTGTGGGCTTAACTGTTATGGATGGATACATTGCATGTGGTTCAGAAACCAATGAGGTATACTGTTATCACAGATCTCTGCCAGTGCCAATCACCGCACACAAATTTGGATCTGTTGATCCCGTTTCTGGGCGTGCAAATAATGATGATAATGTACAGTTTGTTTCTAGTGTCTGCTGGAGAGAGAAGACTAACATGCTGGTAGCCGCCAATTCAATTGGAATTGTAAAACTACTGCAGATGGTTTGA 3054 0.4064 MAANGGTGTEEHKRKANGCNLNPGWQQSMLRSPRMRMSVRKDWPIENATGNEEDMNLTRYLASLAGSGPPSTSFCSTTDTEFTAGESNVRNYKNSNLALVSYPHGSRQCPKDKTENEKQVPFRVSKEVKEMDSDFWSQKSLSSKKVTANITDKDMTINSTNALVVGKKNSSSTYNFPQLKGKGVICIDDDTCIGGAVMSHEGETPASVANFHSDTLLKSDADDNKPCLQRIAKSGKESSFEGGINLREWLKNANHKIDKSESLHIFKQVLEFADSAHSQGFVLQDFGPSCFALYPSGKINYIGSSGQGEDNVMSCNVTKKRPLEQDMCAFHSMGEKQLKLCQETSPLRQHHHFNNGRKTRKVNQDSCTNGSIDSTNRGSEYENSFGCQQFFTGEEQSVSVIVQLEKNWYSSPEELSDGSCTFSSNIYSLGVLLFELLCNIDSWETRSAAMSDLRNRILPPRFLSENPREAGFCLWLLHPEPSSRPNARMILQSELLQELEELHSGNDVSASPSSDTETDGLLSFLILLGEEKQKQIANLTEEISCLKGDINEVERRYSFGRASVEKHFPELRRNSFSFQDPFSSDTCKSISRTSVNESTLMRNINQLQEAYFSMRSQILLRETAAVARHDQDVLKNRGRILSHVQNDNEVPRRNQKSVDCLGSFFEGLCKFVRYSKFEERGTLRNRDLLNSANVMCALSFDRDEDYIAAAGISKRIKIFDFSAILSDSVDIHYPIVEMSNKSNLSCVCWNSYIRNHLASTDYDGVVQMWDASTGQPFSQYKEHQKRAWSVHFSDSDPKLFASGSDDCSVKLWNINEARFLLFTLEGLEKNSLGTIRNPANVCCVQFSPFSTNLLFFGSADYKINGYDLRHTRIPWCTLVGHGKAVSYVKFVDAETLASASTDNSLKLWDLKKTISSGLSSSACDLTFKGHRNEKNFVGLTVMDGYIACGSETNEVYCYHRSLPVPITAHKFGSVDPVSGRANNDDNVQFVSSVCWREKTNMLVAANSIGIVKLLQMV 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00602 1017 SMART WD40_4 685 720 IPR001680 GO:0005515
Bach6g00602 1017 SMART WD40_4 731 770 IPR001680 GO:0005515
Bach6g00602 1017 SMART WD40_4 828 867 IPR001680 GO:0005515
Bach6g00602 1017 SMART WD40_4 920 959 IPR001680 GO:0005515
Bach6g00602 1017 SMART WD40_4 871 909 IPR001680 GO:0005515
Bach6g00602 1017 SMART WD40_4 773 813 IPR001680 GO:0005515
Bach6g00602 1017 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 878 911 - -
Bach6g00602 1017 Pfam WD domain, G-beta repeat 774 813 IPR001680 GO:0005515
Bach6g00602 1017 Pfam WD domain, G-beta repeat 877 909 IPR001680 GO:0005515
Bach6g00602 1017 PRINTS G protein beta WD-40 repeat signature 800 814 IPR020472 -
Bach6g00602 1017 PRINTS G protein beta WD-40 repeat signature 757 771 IPR020472 -
Bach6g00602 1017 PRINTS G protein beta WD-40 repeat signature 896 910 IPR020472 -
Bach6g00602 1017 MobiDBLite consensus disorder prediction 1 34 - -
Bach6g00602 1017 SUPERFAMILY WD40 repeat-like 693 1005 IPR036322 GO:0005515
Bach6g00602 1017 ProSitePatterns Trp-Asp (WD) repeats signature. 896 910 IPR019775 -
Bach6g00602 1017 ProSiteProfiles Trp-Asp (WD) repeats profile. 780 822 IPR001680 GO:0005515
Bach6g00602 1017 Coils Coil 529 556 - -
Bach6g00602 1017 ProSiteProfiles Trp-Asp (WD) repeats profile. 878 911 IPR001680 GO:0005515
Bach6g00602 1017 Gene3D - 664 1017 IPR015943 GO:0005515
Bach6g00602 1017 Gene3D Transferase(Phosphotransferase) domain 1 243 505 - -
Bach6g00602 1017 SUPERFAMILY Protein kinase-like (PK-like) 243 500 IPR011009 -
Bach6g00602 1017 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 780 815 - -
Bach6g00602 1017 PANTHER PROTEIN SPA1-RELATED 2 25 1017 IPR044630 GO:0009640
Bach6g00602 1017 ProSitePatterns Trp-Asp (WD) repeats signature. 757 771 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00602 Bach-Chr6 4467480 4471583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00602 798 958 Miscellaneous Gene Families AT5G08390 28.395 4.29e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Bach6g00602 WD40 0.00039 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00602 K16240 - gmx:100799267 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00602 6 4467480 4471583 Bach6g00602 6 4467480 4471583 ECH