Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00585 GCTATGCACGCCAAGCTCTTACCACAGCTCCGTCTCCTCAACGCTTCTTCCTGCTTCGCCGCCCATTTCTCTTCCATGAAGCTCGGAACTTCAATTCAGTTTTCCAATTCCAGGGCTGTGCCCATTTTCTCTCGGGTCTTCCCATTCAGGCTCAAATACTTGGGCTTGCAGTCTCACCCTCTTCGAAATGGGCAATATGTTTGCAGACTATCGACCCGGTCGTTTCCGGGGAGATCCGGGTCGAGGTCCGAGTTCACCCGGGGAAACCGAGATAGAAGTGTGGTTCGTTCTTCCAAGAGTCTAGTCGAGGACGAGGCTGAACTCAGTGACTGGGTTGATGATTTAAAGACCGATTCCCACCGTGGTCGACTAACTAGCGAAGAGGATGACTTGGATGGGGGCAGAGGCGGCAGTGAAGGGAGGAGTAGAGGGTCTTCGCTGATGAAGAAGAGGAGGGAGGGCGGAGCTGACAGGTTCGGTGAGTCAACCAAGAGGAGAACTCGTGATCCAGTAGAATCGTTCCCAAGGAACTCACGTATAAGTAGGGGATTATTGAATGATGATGGTAAGAAGAAGGAAGATGATTTCCGCTCCTGGAGAAAAAATGTGGAGCCTAGAGGTGGAAATATGAAATCTTATTTGGGGAAGAGAAAAGGTGAGGACTTGAGGAAAGGAGGAAGAGATTCGATGAGAAGGTCACAATTGATTAGCGAGGATGAGGTTGATGAAGATGAGGAGTCGAACAAGTTTGTGGACGTTGGAGATTTGCTAAGTGATGAAGATAGTGATGTTGAAGGTAGTGAGGATGATGATTCATTGAAGAAGGGTAGAAATGGTTCCTTTGGTTTAGAAAAGGAATTGAATATGAGCAGTATGCCAAGAGACTCACCTTCACCAGGGAGATCTGATTCTTATTTAAGTGAGACCAGATTCGACCAATGTTCAATCTCTCCATCATCGTTGAAAGGAATCAAAGATGCTGGTTATGAGAAAATGACTGTTGTTCAGGAGGCAACTCTTCCAGTAATTCTTAGAGGTAAGGATGTCCTTGCCAAGGCTAAAACAGGCACAGGAAAAACTGTAGCGTTTTTGCTTCCATCAATTGAAGTTGTTTTGAAGTCACCTCCAATTGATCGTGATCAAAAGCGACCACCAATTCTTGTCCTTGTCATATGCCCAACTCGTGAACTTGCAATTCAAGCCGCTGCAGAAGCTAATAAATTGCTCAAGTATCACCCTACTATTGGTGTTCAAGTTGTGATTGGGGGGACAAGACTTGCTTTAGAACAGAAACGCATGCAAGCCAATCCTTGCCAGATCCTTGTTGCTACACCTGGAAGGCTTAGAGACCATACTGAGAATACTCCTGGTTTTGCAACTAGGCTGATGGGTGTTAAAGTCCTTGTGCTTGATGAAGCTGATCATTTACTAGACATGGGATTCCGCAAAGACATAGAGAAGATAATTGCTGCAGTTCCTAAACAACGGCAAACACTTCTGTTTTCTGCCACCGTTCCAGAAGAGGTCCGTCAAGTCAGTCATATTGCTTTGAGAAGAGATCATGAATTTATCAATACTGTTCAAGAGGGTAGTGAAGAAACGCATGCACAGGTTGGACAGACATATTTGGTTTCCACATTGGACAAGCATTTCTCCCTACTCTATGCTCTTCTAAAGGAGCATATTGCCGATGATGTTGACTATAAGGTTCTTGTTTTCTGCACAACTGCTATGGTTACAAGACTTGTCGCTGATCTTCTTAGTGAGCTGAAATTGAACATTAGAGAAATCCATTCTAGAAAGTCGCAGAGTTACAGAACCAAGGTCTCCGACGAATTTCGGAAGTCAAAGGGTCTCATTCTTGTTACTTCTGACGTATCTGCACGTGGAGTCGATTATCCAGATGTCACGCTTGTTGTACAGGTCGGCTTGCCAGCTGATAGGGAACAGTATATACATAGGCTCGGTAGAACAGGGCGGAAAGGTAAAGAAGGGCAGGGCATATTATTACTGACTCCTTGGGAAGAATTCTTTTTGTCTGCAGTAAAGGATTTGCCAATTACCAAAGCTCCAGTACCTCCAATTGACCCTGACACGAAGAGAAAGGTGGAAAAGGCTCTATGTCAAGTGGAGATGAAGACCAAGGAATCAGCATATCAGGCTTGGCTTGGTTACTACAATTCCAATAAAAAAGTGGGGCGAGACAAGTATAGGCTTGTGGAGCTTGCAAATGAGTTCAGTCGAAGTATGGGACTCGATAACCCTCCAGCCATTCCCAAGCTTGTTCTTGGCAAGATGGGTCTCAGAAATATCCCGGGTTTACGTTCCAAATAGGTTATAATTATGTGGTCAATGTAATCACTTAATGTTATGAAACAAGATGTTCTGATATTTAAGATGTTCCGTCAAGACCTGAAACATTCT 2424 0.4472 MHAKLLPQLRLLNASSCFAAHFSSMKLGTSIQFSNSRAVPIFSRVFPFRLKYLGLQSHPLRNGQYVCRLSTRSFPGRSGSRSEFTRGNRDRSVVRSSKSLVEDEAELSDWVDDLKTDSHRGRLTSEEDDLDGGRGGSEGRSRGSSLMKKRREGGADRFGESTKRRTRDPVESFPRNSRISRGLLNDDGKKKEDDFRSWRKNVEPRGGNMKSYLGKRKGEDLRKGGRDSMRRSQLISEDEVDEDEESNKFVDVGDLLSDEDSDVEGSEDDDSLKKGRNGSFGLEKELNMSSMPRDSPSPGRSDSYLSETRFDQCSISPSSLKGIKDAGYEKMTVVQEATLPVILRGKDVLAKAKTGTGKTVAFLLPSIEVVLKSPPIDRDQKRPPILVLVICPTRELAIQAAAEANKLLKYHPTIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLRDHTENTPGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSATVPEEVRQVSHIALRRDHEFINTVQEGSEETHAQVGQTYLVSTLDKHFSLLYALLKEHIADDVDYKVLVFCTTAMVTRLVADLLSELKLNIREIHSRKSQSYRTKVSDEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADREQYIHRLGRTGRKGKEGQGILLLTPWEEFFLSAVKDLPITKAPVPPIDPDTKRKVEKALCQVEMKTKESAYQAWLGYYNSNKKVGRDKYRLVELANEFSRSMGLDNPPAIPKLVLGKMGLRNIPGLRSK 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00585 776 MobiDBLite consensus disorder prediction 83 98 - -
Bach6g00585 776 CDD SF2_C_DEAD 539 670 - -
Bach6g00585 776 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 308 336 IPR014014 GO:0003724
Bach6g00585 776 MobiDBLite consensus disorder prediction 182 203 - -
Bach6g00585 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 678 IPR027417 -
Bach6g00585 776 Gene3D - 283 523 IPR027417 -
Bach6g00585 776 SMART helicmild6 580 661 IPR001650 -
Bach6g00585 776 Gene3D - 531 754 IPR027417 -
Bach6g00585 776 MobiDBLite consensus disorder prediction 210 237 - -
Bach6g00585 776 MobiDBLite consensus disorder prediction 71 98 - -
Bach6g00585 776 MobiDBLite consensus disorder prediction 290 305 - -
Bach6g00585 776 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 556 706 IPR001650 -
Bach6g00585 776 Pfam Helicase conserved C-terminal domain 552 661 IPR001650 -
Bach6g00585 776 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 339 522 IPR014001 -
Bach6g00585 776 MobiDBLite consensus disorder prediction 121 305 - -
Bach6g00585 776 CDD DEADc_MSS116 315 524 - -
Bach6g00585 776 SMART ultradead3 327 533 IPR014001 -
Bach6g00585 776 MobiDBLite consensus disorder prediction 121 136 - -
Bach6g00585 776 MobiDBLite consensus disorder prediction 143 174 - -
Bach6g00585 776 Pfam DEAD/DEAH box helicase 333 510 IPR011545 GO:0003676|GO:0005524
Bach6g00585 776 PANTHER RNA HELICASE 269 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00585 Bach-Chr6 4289835 4294284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00585 308 689 Eukaryotic Initiation Factors Gene Family AT3G19760 27.877 7.11e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00585 - - qsa:O6P43_027365 1059.67