LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach6g00581	ATGAATGCAAAGGGACATAAGTTTGTGAGGTTTGAGGATTGGAGTTCAGAATCATCTTTCAGTGTGGAGCAGCAAAATCCCAGTAATGGATACCAAGGAAGAAAAGTTAGGCCAATCCTAAGTGCTGTTTTAAAGAGTATTAGAAGAAGAGTCGAGAGTGGTTCTGAAAAGATGAAAAGCTCGAGAAAAACTTCAGCTGTTCATCCTGTAAGCAATGGGCCTCACAAAAAAGAGGGTTCTAGCAGAAAAATTCTTGACCCTCAGGGACCAGTCCTTCAGAGATGGAACAAAATATTTGTAATAACATGTGTAATGGCAGTCTCAGTTGATCCATTATTCTTTTACATCCCAGTGATTGTTGGAAACAAGAGATGCCTTCAACTGAATAATGCATTGCAGATCAGTGCTTCTGTTCTTCGTACTTTCTTTGATCTTTTCTACATTCTTCGCATAATCTTTCAGTTCCGAACTGGGTTTATAGCTCCTTCTTCTCGAGTATTTGGAAGGGGTGAGCTAATCAAGGATCCTATCGCTATAACCAAAAGATACTTGTCTTCCCACTTCATCATTGACATTCTGTCAATTATTCCTCTACCACAGTTGGTCGTTTTATTAATTATTCCGGAGCTAAGAGGCGCAGCGGCAAAGGAGCTGTTGAAGTACGTAGTAATAGTTCAGTATGTGCCAAGACTTATACGGATCATTCCATTACTGAGGGAAGTTACTAGAACTTCGGGCATACTGACTGAGACTGCATGGGCTGGAGCTGCGTTTAATCTTTTTCTCTATATGCTCGGAAGTCATATTGTTGGAGCTTTCTGGTACCTGTTCTCTGTGGAGTCAGAGATTCGGTGCTGGCGACGAACTTTGAGGCGTAATAACCTCGATGATGAATTACACTTCGACTGCGATGCCGTCACTCCTGAATCCTTTTCATTTATCAACAGCACTTGCGCTCCTACTGATCCTGATGAAATTACAAATTCAACAGTATACAATTTCGGGATATATATCGACGCTCTAACATCTAAAGTGGTAGAATCAACAACAGCTTTTCATGAGAAGTTCTTCTACTGCTTTTGGTGGGGTCTGCGCAATGTAAGTTCTCTTGGCCAAAACCTCAAGACAAGTACATATGTTTGGGAGATAATCTTTGCCATTTCCATTGCCGTCATTGGATTGGTTTTATTCGCGTTACTTATTGGAAACATGCAGAAATATCTACAATCTACAACTGTGAGAGTCGAAGAAATGAGGGTCAAAAGGCGAGATACAGAACAGTGGATGTCCCACCGCATGCTACCTGATAACTTAAGGGAAAGAATTAGACGGTATGAGCATTACAAATGGCAAGAAAATAGGGGTGTTGAGGAGGAAACGTTAATTCGCAACCTTCCTAAAGATCTCAGAAGGGATATAAAGCGTCATCTTTGCTTGCCATTGCTTAAAAAAGTGCCAATGTCTGAGAAAATGGATGAACAGCTGTTGGATGCGATGAGTGATAGATTGAAGCCAATTCTGTACACTGAAAACAGCTACATTGTTCGCGAAGGCGATCCAGTTGATGAAATGCTCTTCATTATGCGAGGAAACCTTAGAACTATGACCACAAATGGTGGAAGAACTGGTTTCTTCAACTCCTTTGAACTTAAGGCAGGTGACTTCTGCGGAGAAGAGCTTCTAACATGGGCATTGGACCCCAACTCCTCCTCAAATCTTCCCATTTCAACTAGAACAGTACAATCTATATCAGAAGTTGAGGCTTTTGCTCTTATGCCTGATGATTTTAAGTTTGTTGCTTCCCAATTTCGACGTCTTCACAGCAAGCAGCTTCAGCACACATTCAGATTCTATTCCCTGCAATTTAGAACATGGGGTGCCTGTTTCATACAAGCAGCTTGGCGTCGCTACACCAAAAAGAAGATTGATAGATCATTACGTGAAGCAGAAGATAGGCTGAAAGATGCTTTGGCAAATGAAGATGGGCATACGGCAAGTCTTGGTGCCACAATATTTGCATCAAGGTTTGCTGCCAATGCATTGAGAAACTTGCGACAGAATGGTGAGCGCAGCGGCAGATTCCCACCGAGAATGCTACATCTGCTGCCTCAGAAGCCAGCTGAGCCTGATTTCTCTACTCAACAACACTAG	2151	0.4207	MNAKGHKFVRFEDWSSESSFSVEQQNPSNGYQGRKVRPILSAVLKSIRRRVESGSEKMKSSRKTSAVHPVSNGPHKKEGSSRKILDPQGPVLQRWNKIFVITCVMAVSVDPLFFYIPVIVGNKRCLQLNNALQISASVLRTFFDLFYILRIIFQFRTGFIAPSSRVFGRGELIKDPIAITKRYLSSHFIIDILSIIPLPQLVVLLIIPELRGAAAKELLKYVVIVQYVPRLIRIIPLLREVTRTSGILTETAWAGAAFNLFLYMLGSHIVGAFWYLFSVESEIRCWRRTLRRNNLDDELHFDCDAVTPESFSFINSTCAPTDPDEITNSTVYNFGIYIDALTSKVVESTTAFHEKFFYCFWWGLRNVSSLGQNLKTSTYVWEIIFAISIAVIGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDTEQWMSHRMLPDNLRERIRRYEHYKWQENRGVEEETLIRNLPKDLRRDIKRHLCLPLLKKVPMSEKMDEQLLDAMSDRLKPILYTENSYIVREGDPVDEMLFIMRGNLRTMTTNGGRTGFFNSFELKAGDFCGEELLTWALDPNSSSNLPISTRTVQSISEVEAFALMPDDFKFVASQFRRLHSKQLQHTFRFYSLQFRTWGACFIQAAWRRYTKKKIDRSLREAEDRLKDALANEDGHTASLGATIFASRFAANALRNLRQNGERSGRFPPRMLHLLPQKPAEPDFSTQQH	716

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach6g00581	716	CDD	CAP_ED	489	618	IPR000595	-
	Bach6g00581	716	Gene3D	Jelly Rolls	485	605	IPR014710	-
	Bach6g00581	716	SMART	cnmp_10	487	618	IPR000595	-
	Bach6g00581	716	Pfam	Cyclic nucleotide-binding domain	508	598	IPR000595	-
	Bach6g00581	716	MobiDBLite	consensus disorder prediction	51	85	-	-
	Bach6g00581	716	Gene3D	-	98	411	-	-
	Bach6g00581	716	MobiDBLite	consensus disorder prediction	687	716	-	-
	Bach6g00581	716	FunFam	Cyclic nucleotide-gated ion channel 1	414	478	-	-
	Bach6g00581	716	FunFam	Cyclic nucleotide-gated ion channel 1	485	603	-	-
	Bach6g00581	716	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	59	711	-	-
	Bach6g00581	716	Gene3D	Helix hairpin bin	414	478	-	-
	Bach6g00581	716	Pfam	Ion transport protein	94	415	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Bach6g00581	716	SUPERFAMILY	Voltage-gated potassium channels	86	409	-	-
	Bach6g00581	716	Coils	Coil	639	659	-	-
	Bach6g00581	716	ProSiteProfiles	cAMP/cGMP binding motif profile.	487	571	IPR000595	-
	Bach6g00581	716	SUPERFAMILY	cAMP-binding domain-like	416	610	IPR018490	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach6g00581	Bach-Chr6	4260589	4264352	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach6g00581	1	713	Ion Channels	AT5G53130	64.494	0.0	943

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach6g00581	K05391		-	qsa:O6P43_017768	1055.82