Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00580 ATGTTGACTTCTAGGAACAAAGCTCTTAACCCTGGGGAGCCATTCTTAAGGAGATGGAACAAAATATTTGTGTGCACAAGTTTGATAGCAGTCTCTGTTGACTTACTCTTCTTCTACATCCCTGTGTTCAATGAGCAAGAAAAATGCCTAGATTGGGATGGAACCTTGAAGGTTACTGCATGTGTTCTTCGTTCAGTCCTCGATCTTATTTATGTTCTTCATCTCATCTTTCAGTTTCGCACCGGGTTTATTGCGCCTTCTTCTAGAGTTTATGGAAGGGGTGAGCTCGTTGCTGATTCTGTGGCTATAGTGAAAAAATACTTATTTGGGTACTTTGTCATTGATATTCTATCAATCATTCCACTACCACAGGTGTTTGTTTTAGGTATCATTCCGATTCTGAAGAGCTCAGCTCCATTTGGCACGATTGACTTGTTGAAGATCATAATATTTGTCCAGCATTTGCCAAGAGTTATACGTATCTACCCAATATGGAAACAGATGCGTAGAATATCTGCAATATTGACTGGACCAAGGACAGCATGGTCTGCTGCTGCTCCTTTTCTTCTTTTCTATATTCTAGCAAGTCATATTGTTGGATCTTCCTATTACCTGTTTTCAGTCGAATCTGAGCTTCGCTGCTGGCAACAAGAGTTGAAGAATTCTCAATTGTACAATATTGTGCTCTCTCATGATGTTTCCTTTAGCTGTGGACAACACAAACAAACTATTCTTTCACTTCTCAATACTTCTTGCTTTTTCATTGATGCTAATGAAATGAAAGATCCAACAGCTTTCGATTTTGGAATCTTTAAAGAAGCTCTATCGTCTCATGTGGTAGAATCAAGTACCAAGTTTCTTCAGAAGTTCTTTTACTGCCTTTGGTGGGGTTTGCGCAATATCAGTTCTCTTGGCCAAAACCTCCAGACAAGCACTTTTATTTGGGAGATAGTTTTTGCAATCTTCATCTCCATCTTTGGTTTAATTTTGTTCGCAGTAATTATTGGAAACATGCAGAGATATCTGCAATCTAGAATTGTGAGAGAAGAAGAGAGGATGGTGAAATCCCAGGACACAGAGCGGTGGATGTCCCACCGCATGCTACCTGATAATTTAAGGGAAAGAATTAGAAGGTATGAACGTTACAAATGGCAAGAAAATGGGGGTGTTGACGAGGAAACAATAATTCGCAACCTTCCTAAAGATCTCAGAAGGGATATAAAGCGTCATCTTTGCATATCATTGCTGAAAGAAGTGCCAATGTATGAGAAAATGGATGAACACCTGTTGGATGCGATGAGTGATAGATTGAAGCCAATTCTGTACACTGAAAACAGCTGCATTGTTCGCGAAGGCGATCCAGTTGATGAAATGCTCTTCATTATGCGAGGAAAGCTTACAACTATGACCACAAATGGTGGAAGAACTGGTTTCTTCAACTCCGTTGTCCTTAAGGCAGGTGACTTCTGCGGAGAAGAGCTTCTAACATGGGCATTGGACCCCAACGCCTCCTCAAATCTTCCCATTTCAACTAGAACAGTACAATCTATATCAGAAGTTGAGGCTTTTGCTCTTACGCCTGATGATTTTAAGATTCTATTCCCTGCAATGGAGGATATGGGCTGCCTGTTTCATACAAGCAGCTTGGCGTCGCTACAAGAAAAAGAAGATGGAGAGATCAATGAGCAGGAAAAATGCCTAGATTTGGATGGAACCTTGAAGATTACTGCATGTGTTCTTCGTTCAATCTTTGATCTTATTTATGTTCTTCGTATCATCATTCAGCTTCGCCCCGGGTTTATTGTGCCTTCTTATGGAGCATATGGACGGGGTGAGTTGATTGCTGATTCTGCGGCAGCAGTGAAAAGATACTTATCTGGTTACTTTGTCATTGACATTCTATCAATCATTCCACTACCACAGGTGGTTGTTTTAGGTATCATTCCGATTCTGAAGAGCTCAGTTCCATTTGGCACGATTGATTTATTGAAGATCATAATAGTTGTCCAGCATTTGCCAAGAGTTATACGTATCTACCCAATATGGAAACACATGCGTAGAACATCTGCAATATTGACTGGATCAGGGACAGCTTGGTCTGCTGCTGCTCCTAATCTTCTTTTCTATATTCTAGCAAGTCATATTGTTGGATCTTCCTATTACCTGTTTTCAGTAGAATCCGAGCTTCGCTGCTGGCAACAAGAGTTGAAGAATTCTAAATTGTACAATGTTGTGCTCTCTCATGATGTTTCCTTTAGCTGTGGAAAACACAAAGAAACTGTTCTTTCACTTCTCAATACTTCTTGCTTTTTCATTGATGCTAATGAAATGAAAGATCCAACAGCCTTCGATTTTGGAATATTTAAAGAAGCTCTATCATCTCATGTGGTACAATCAAGTGCACATTTTCTTCTGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATGTCAGTTCTCTTGGCCAAAACCTCCAGACAAGCACTTATATTTGGGAGATAATTTTTGCAATCTTCATTTCCATCGTCAGTTTGGTTTTGTTCTCAGTAATTATTGGAAACATGCAGAGATATCTGCAATCTAGAAGTGTGAGACAAGAAGAGATGATGGTGAAATCCCAGGACACAGAGCGGTGGATGAAGCACAGAAAGCTTCCTGAATACCTGAAGGCAAGAATTAGAAGGTATGAACATTACAAATGGCAAGAAAAGGGGGGTGTTGATGAGGAAACTTTAATCCGAAACCTTCCCAAAAATCTCAGAAGGGATACAAAGCGTCATGTCTGCTTGGCTTTAATTAACAAGGTCCCAATATTTGAAGAAATGGATGAACGTTTGTTGGATGCATTGTGTGCTAGGCTTAAGCCAGTGCTTTATACAGAGAAAAGCTACATTTTCCGTGAAGGAGAACTTGTTGATGAAATGCTGTTCATCATGCAAGGAAGCCTTGCTTCTATGACAACAAATGGTGGAAGAACTCTTTTCTTCAATTCCGCACCTCTCAAGGCAGGTGACTTCTGCGGAGAAGAGCTTCTAACATGGGCCTTGGACCCCAACTCCTCAAATCTTCCCATTTCAACCAGAACAGTACAAACTATATCTGAAGTTGAGGCTTTTGCTCTCATGCCTGATGATTTGAAGTTTGTTGCTTCTCAATTTCGGCATCTCCACAGCAAGAAGCTTCAGCACACTTTCAGGTTCTATTCCCTGCAATGGAGGACATGGGCTGCTTGTTTCATACAAGGAGCTTGGCGTAGCTACACCAAAAAGAAGCTTGAGAGATCATTACGTGAAGCAGAAGATAGGCTGAAAGATGCTTTGGCAAATGAAGATGGACACTCACCAAGTCTTGGTGCCACAATGTTTGCATCAAGATTTGCTGCCAATGTATTGCGAAACTTGAAGCAGAATGGTGAGCGCAACAGATTTAACAGTTGA 3438 0.4075 MLTSRNKALNPGEPFLRRWNKIFVCTSLIAVSVDLLFFYIPVFNEQEKCLDWDGTLKVTACVLRSVLDLIYVLHLIFQFRTGFIAPSSRVYGRGELVADSVAIVKKYLFGYFVIDILSIIPLPQVFVLGIIPILKSSAPFGTIDLLKIIIFVQHLPRVIRIYPIWKQMRRISAILTGPRTAWSAAAPFLLFYILASHIVGSSYYLFSVESELRCWQQELKNSQLYNIVLSHDVSFSCGQHKQTILSLLNTSCFFIDANEMKDPTAFDFGIFKEALSSHVVESSTKFLQKFFYCLWWGLRNISSLGQNLQTSTFIWEIVFAIFISIFGLILFAVIIGNMQRYLQSRIVREEERMVKSQDTERWMSHRMLPDNLRERIRRYERYKWQENGGVDEETIIRNLPKDLRRDIKRHLCISLLKEVPMYEKMDEHLLDAMSDRLKPILYTENSCIVREGDPVDEMLFIMRGKLTTMTTNGGRTGFFNSVVLKAGDFCGEELLTWALDPNASSNLPISTRTVQSISEVEAFALTPDDFKILFPAMEDMGCLFHTSSLASLQEKEDGEINEQEKCLDLDGTLKITACVLRSIFDLIYVLRIIIQLRPGFIVPSYGAYGRGELIADSAAAVKRYLSGYFVIDILSIIPLPQVVVLGIIPILKSSVPFGTIDLLKIIIVVQHLPRVIRIYPIWKHMRRTSAILTGSGTAWSAAAPNLLFYILASHIVGSSYYLFSVESELRCWQQELKNSKLYNVVLSHDVSFSCGKHKETVLSLLNTSCFFIDANEMKDPTAFDFGIFKEALSSHVVQSSAHFLLKFFYCFWWGLRNVSSLGQNLQTSTYIWEIIFAIFISIVSLVLFSVIIGNMQRYLQSRSVRQEEMMVKSQDTERWMKHRKLPEYLKARIRRYEHYKWQEKGGVDEETLIRNLPKNLRRDTKRHVCLALINKVPIFEEMDERLLDALCARLKPVLYTEKSYIFREGELVDEMLFIMQGSLASMTTNGGRTLFFNSAPLKAGDFCGEELLTWALDPNSSNLPISTRTVQTISEVEAFALMPDDLKFVASQFRHLHSKKLQHTFRFYSLQWRTWAACFIQGAWRSYTKKKLERSLREAEDRLKDALANEDGHSPSLGATMFASRFAANVLRNLKQNGERNRFNS 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00580 1145 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 564 1129 - -
Bach6g00580 1145 ProSiteProfiles cAMP/cGMP binding motif profile. 421 505 IPR000595 -
Bach6g00580 1145 FunFam Cyclic nucleotide-gated ion channel 1 936 1053 - -
Bach6g00580 1145 SUPERFAMILY Voltage-gated potassium channels 569 860 - -
Bach6g00580 1145 CDD CAP_ED 938 1068 IPR000595 -
Bach6g00580 1145 FunFam Cyclic nucleotide-gated ion channel 1 348 412 - -
Bach6g00580 1145 Pfam Ion transport protein 575 866 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach6g00580 1145 Pfam Ion transport protein 19 345 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach6g00580 1145 Gene3D Jelly Rolls 936 1055 IPR014710 -
Bach6g00580 1145 Gene3D Jelly Rolls 419 536 IPR014710 -
Bach6g00580 1145 Gene3D - 563 861 - -
Bach6g00580 1145 SUPERFAMILY cAMP-binding domain-like 865 1059 IPR018490 -
Bach6g00580 1145 Pfam Cyclic nucleotide-binding domain 442 533 IPR000595 -
Bach6g00580 1145 SUPERFAMILY Voltage-gated potassium channels 14 348 - -
Bach6g00580 1145 Coils Coil 1089 1109 - -
Bach6g00580 1145 Gene3D Helix hairpin bin 864 929 - -
Bach6g00580 1145 Gene3D Helix hairpin bin 343 412 - -
Bach6g00580 1145 CDD CAP_ED 423 530 IPR000595 -
Bach6g00580 1145 FunFam Cyclic nucleotide-gated ion channel 1 419 536 - -
Bach6g00580 1145 Gene3D - 22 342 - -
Bach6g00580 1145 SUPERFAMILY cAMP-binding domain-like 350 535 IPR018490 -
Bach6g00580 1145 ProSiteProfiles cAMP/cGMP binding motif profile. 938 1023 IPR000595 -
Bach6g00580 1145 SMART cnmp_10 938 1068 IPR000595 -
Bach6g00580 1145 SMART cnmp_10 421 549 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00580 Bach-Chr6 4251044 4259310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00580 2 533 Ion Channels AT5G53130 61.049 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00580 K05391 - qsa:O6P43_017768 764.992