Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00578 ATGGAACAAAATTTTTGTGTCACAAGTTTGATAGCAGTCTCTGTTGACTTAATCTTCTTCTACATCCCTGTGTTCAGTGAGCAAGAAAAATGCCTAGATTGGGATGGAGCCTTGAAGGTTACTGCATGTGTTCTTCGTTCAGTCCTCGATCTTCTTTATGTTCTTCATATCATCTTTCAGTTTCGCACCGGGTTTATTGCGCCTTCTTCTAGAGTATATGGAAGGGTTGAGCTCGTTGCTGATTCTGTGGCTATAGTGAAAAAATACTTATTTGGGTACTTTGTCATCGATATTCTATCGATCATTCCACTACCACAGGTGGTTGTTTTAGATGTCATTCGGATCCCGAAGAGCTCAGTTCCATTTGGCACGATTGACTCTTTGAAGATCATAATATTTGTCCAGTATTTGCCAAGAGTTATACGGATATATCCAATATGGAAACAGATGCCTAGAACATCCGCAAGATTGACTGGATCAGTGAGAACAATGTCTGCTGCTGCTTCTAATCTTCTTTTCTATATTCCAGCAAGTCATAGATATCTGCAATCTAGAATTGTGAGAGAAGAAGAGATGATGGTGAAATCCCAGGACACAGAGCGGTGGATGTCCCACCGCATGCTACCTGATGATTTAAGGGAAAGAATTAGAAGGTATGAACGTTACAAATGGCAAGAAAATGGGGGTGTTGACGAGGAAACATTAATTCGCAACCTTCCAAAAGATCTCAGAAGGGATATAAAGCTTCATCTTTGCTTGGATTTGCTTAGAAAAGTGCCAATGTTAGAGCAATTCGATGTATGGATGTTGGACGCGATGAGTGAGAGATTGAAGCCAATCCTATACACTGAAAACAACTACATTGTTCGTGAAGGAGATCCAGTTGATGAAATGCTCTTCATTATGCGAGGAAAGCTTGAAACTGTGACCACAGATGGTGGAAGATCTGGTTTCTTCAATAGGGCATTTCTTAAGACAGGTGACTTCTGCGGAGAAGAGCTTTTAACATGGGTCTTGGACCCCAAGTCCTCATCACGTCTTCCCATCTCAACCAGAACAGTCAAAACGCTATCAGAAGTTGAGGCTTTCGCTCTCACGCTTGATGATTTAAAGTTTGTTGCTTCCCAATTCCTAAGTCTCCACAGCAAGCGAATTCAGCACACTTTCAGGCAAGGCTTAGTATCATATTTATCTTTTTCTTACCCGATATAG 1212 0.4117 MEQNFCVTSLIAVSVDLIFFYIPVFSEQEKCLDWDGALKVTACVLRSVLDLLYVLHIIFQFRTGFIAPSSRVYGRVELVADSVAIVKKYLFGYFVIDILSIIPLPQVVVLDVIRIPKSSVPFGTIDSLKIIIFVQYLPRVIRIYPIWKQMPRTSARLTGSVRTMSAAASNLLFYIPASHRYLQSRIVREEEMMVKSQDTERWMSHRMLPDDLRERIRRYERYKWQENGGVDEETLIRNLPKDLRRDIKLHLCLDLLRKVPMLEQFDVWMLDAMSERLKPILYTENNYIVREGDPVDEMLFIMRGKLETVTTDGGRSGFFNRAFLKTGDFCGEELLTWVLDPKSSSRLPISTRTVKTLSEVEAFALTLDDLKFVASQFLSLHSKRIQHTFRQGLVSYLSFSYPI 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00578 403 SMART cnmp_10 261 389 IPR000595 -
Bach6g00578 403 Pfam Cyclic nucleotide-binding domain 282 372 IPR000595 -
Bach6g00578 403 FunFam Cyclic nucleotide-gated ion channel 1 188 252 - -
Bach6g00578 403 CDD CAP_ED 261 380 IPR000595 -
Bach6g00578 403 SUPERFAMILY Voltage-gated potassium channels 9 174 - -
Bach6g00578 403 Gene3D Jelly Rolls 259 378 IPR014710 -
Bach6g00578 403 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 181 391 - -
Bach6g00578 403 Gene3D Helix hairpin bin 187 252 - -
Bach6g00578 403 ProSiteProfiles cAMP/cGMP binding motif profile. 261 345 IPR000595 -
Bach6g00578 403 FunFam Cyclic nucleotide-gated ion channel 1 259 377 - -
Bach6g00578 403 Pfam Ion transport protein 7 155 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach6g00578 403 SUPERFAMILY cAMP-binding domain-like 189 382 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00578 Bach-Chr6 4237308 4240152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00578 179 390 Ion Channels AT4G01010 70.283 9.30e-107 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00578 K05391 - gmx:100797784 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00578 6 4237308 4240152 Bach6g00578 6 4237308 4240152 ECH