Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00577 ATGCTTATATTTGCATACAGGTTTGAGGATTGGATTTCAGAATCATTTTTCAGTGTGGAGCAGCAAAATCCCAGTAATGGATACCAAGGAAGAAAAATTAGGCCAACCCTAAGTGCTGTTTTAAAGAGTATTAGAAGAAGAGTCGAGAGTGGTTCTGAAAAGATGAAAAGCTTGAGAAAAACTTCAGCTGTTCATCCTTTCCGAACTGGGTTTATATCTCCTTCTTCTCGAGTATTTGGAAGGGGTGAGCTAATCATGGAAGGGCTAAAAGGCGCAGCGGCAAAGGAGCTGTTGAAGTACGTAGTAATAGTTCAGTATGTGCCAAGACTTATACGGATCATTCCATTACTGACGGAAGTTACTAGAACTTCGGGCATACTGACTGAGACTGCATGGGCTGGAGCTGCGTTTAATCTTTTTCTCTATATGCTCGGAAGTCATATTGTTGGAGCTTTCTGGTACCTGTTCTCTGTGGAGTCAGAGATTCGGTGCTGGCGACGAACTTTGAGGCGTAATAACCTCGATGATGATTTACACTTCGACTGCGATGCCGTCACTCCTGAATCCTTTTCATTTATCAACAGCACTTGCGCTCCTACTGATCCTAATGAAATTACAAATTCAACAGTATACAATTTCGGGATATATATTGACGCTCTAACATCTCAAGTGGTAGAATCAACAACAGCTTTTCATGAGAAGTTCTTCTACTGCTTTTGGTGGGGTCTACGCAATGTAAGAAATATCTACAATCTACAACTGAGAGTCGAAGAAATGAGAGTCAAAAGGCGAGATACAGAACAGTGGATGTCCCACCGCATGCTACCTGATAACTTAAGGGAAAGAATTAGACGGTATGAGCATTACAAATGGCAAGAAAATAGGGGTGTTGAGGAGGAAACGTTAATTCGCAACCTTCCTAAAGATCTCAGAAGGGATATAAAGCGTCATCTTTGCTTGCCATTGCTTAAAAAAGTGCCAATGTCTGAGAAAATGGATGAACAGCTGTTGGATGCGATGAGTGATAGATTGAAGCCAATTCAGTACACTGAAAACAGCTACATCGTTCGCGAAGGCGATCCAGTTGATGAAATGCTCTTCATTATGCGAGGAAACCTTAGAACTATGACCACAAATGGTGGAAGAACTGGTTTCTTCAAGTCCTTTGAACTTAAGGCGGGTGACTTCCGCGGAGAAGAGCTTCTAACATGGGCATTGGACCCCAACTCCTCCTCAAATCTTCCCATTTCAATTAGAACAGTACAATCTATATCAGAAGTTGAGGCTTTTGCTCTTATGCCTGATGATTTTAAATTCTATTCACTGCAATTTAGAACATGGGGTGCCTGTTTCATACAAGCCGCTTGGCGTCGCTACACCAAAAAGAAGATTGATAGATCATTACGTGAAGCAGAAGATAGGCTGAAAGATGCTTTGGCAAATGAAGATGGGCATACGGCAAGTCTTGGTGCCACAATATTTGCATCAAAGTTTGCTGCAAATGCATTGAGAAACTTGCGACAGAATGGTGAGCGCAGCTGCAGATTCCCACAGAGAATGCTACATCTGCTGCCTCAGAAGCCAGCTGAGCCTGATTTCTCTACCCAACAACACTAG 1617 0.4242 MLIFAYRFEDWISESFFSVEQQNPSNGYQGRKIRPTLSAVLKSIRRRVESGSEKMKSLRKTSAVHPFRTGFISPSSRVFGRGELIMEGLKGAAAKELLKYVVIVQYVPRLIRIIPLLTEVTRTSGILTETAWAGAAFNLFLYMLGSHIVGAFWYLFSVESEIRCWRRTLRRNNLDDDLHFDCDAVTPESFSFINSTCAPTDPNEITNSTVYNFGIYIDALTSQVVESTTAFHEKFFYCFWWGLRNVRNIYNLQLRVEEMRVKRRDTEQWMSHRMLPDNLRERIRRYEHYKWQENRGVEEETLIRNLPKDLRRDIKRHLCLPLLKKVPMSEKMDEQLLDAMSDRLKPIQYTENSYIVREGDPVDEMLFIMRGNLRTMTTNGGRTGFFKSFELKAGDFRGEELLTWALDPNSSSNLPISIRTVQSISEVEAFALMPDDFKFYSLQFRTWGACFIQAAWRRYTKKKIDRSLREAEDRLKDALANEDGHTASLGATIFASKFAANALRNLRQNGERSCRFPQRMLHLLPQKPAEPDFSTQQH 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00577 538 Coils Coil 41 61 - -
Bach6g00577 538 Pfam Ion transport protein 101 245 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach6g00577 538 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 255 533 - -
Bach6g00577 538 FunFam Cyclic nucleotide-gated ion channel 1 255 319 - -
Bach6g00577 538 Gene3D Helix hairpin bin 253 319 - -
Bach6g00577 538 ProSiteProfiles cAMP/cGMP binding motif profile. 328 412 IPR000595 -
Bach6g00577 538 Coils Coil 461 481 - -
Bach6g00577 538 CDD CAP_ED 330 437 IPR000595 -
Bach6g00577 538 Gene3D Jelly Rolls 326 445 IPR014710 -
Bach6g00577 538 SUPERFAMILY Voltage-gated potassium channels 100 243 - -
Bach6g00577 538 SMART cnmp_10 328 449 IPR000595 -
Bach6g00577 538 SUPERFAMILY cAMP-binding domain-like 257 458 IPR018490 -
Bach6g00577 538 FunFam Cyclic nucleotide-gated ion channel 1 326 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00577 Bach-Chr6 4231022 4234224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00577 64 535 Ion Channels AT5G53130 55.614 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00577 K05391 - qsa:O6P43_017768 647.121